Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC16.33■□□□□ 0.2
CASQ1P31415 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CASQ1P31415 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CASQ1P31415 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.33■□□□□ 0.2
CASQ1P31415 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CASQ1P31415 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.33■□□□□ 0.2
CASQ1P31415 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.33■□□□□ 0.2
CASQ1P31415 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.33■□□□□ 0.2
CASQ1P31415 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.33■□□□□ 0.2
CASQ1P31415 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CASQ1P31415 AC018845.2-201ENST00000568326 409 ntBASIC16.33■□□□□ 0.2
CASQ1P31415 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CASQ1P31415 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CASQ1P31415 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CASQ1P31415 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CASQ1P31415 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CASQ1P31415 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CASQ1P31415 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CASQ1P31415 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CASQ1P31415 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.33■□□□□ 0.2
CASQ1P31415 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CASQ1P31415 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC16.33■□□□□ 0.2
CASQ1P31415 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CASQ1P31415 AL354702.1-201ENST00000442006 1960 ntBASIC16.33■□□□□ 0.2
CASQ1P31415 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.33■□□□□ 0.2
CASQ1P31415 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CASQ1P31415 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC16.33■□□□□ 0.2
CASQ1P31415 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CASQ1P31415 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.32■□□□□ 0.2
CASQ1P31415 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CASQ1P31415 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CASQ1P31415 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CASQ1P31415 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.32■□□□□ 0.2
CASQ1P31415 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CASQ1P31415 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CASQ1P31415 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.32■□□□□ 0.2
CASQ1P31415 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.32■□□□□ 0.2
CASQ1P31415 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.32■□□□□ 0.2
CASQ1P31415 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 AC104457.1-201ENST00000401024 814 ntBASIC16.32■□□□□ 0.2
CASQ1P31415 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CASQ1P31415 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.32■□□□□ 0.2
CASQ1P31415 AKAP8P1-201ENST00000434743 1349 ntBASIC16.32■□□□□ 0.2
CASQ1P31415 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.32■□□□□ 0.2
CASQ1P31415 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 AC112191.1-201ENST00000523689 701 ntBASIC16.32■□□□□ 0.2
CASQ1P31415 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.32■□□□□ 0.2
CASQ1P31415 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.32■□□□□ 0.2
CASQ1P31415 KRT8P22-201ENST00000562317 1415 ntBASIC16.32■□□□□ 0.2
CASQ1P31415 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.32■□□□□ 0.2
CASQ1P31415 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC16.32■□□□□ 0.2
CASQ1P31415 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CASQ1P31415 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ1P31415 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ1P31415 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ1P31415 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ1P31415 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ1P31415 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ1P31415 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.31■□□□□ 0.2
CASQ1P31415 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CASQ1P31415 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.31■□□□□ 0.2
CASQ1P31415 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CASQ1P31415 KRT8P24-201ENST00000560290 1559 ntBASIC16.31■□□□□ 0.2
CASQ1P31415 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ1P31415 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ1P31415 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ1P31415 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.31■□□□□ 0.2
CASQ1P31415 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CASQ1P31415 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ1P31415 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CASQ1P31415 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ1P31415 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CASQ1P31415 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ1P31415 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.31■□□□□ 0.2
CASQ1P31415 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ1P31415 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ1P31415 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CASQ1P31415 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.31■□□□□ 0.2
CASQ1P31415 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ1P31415 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.31■□□□□ 0.2
CASQ1P31415 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.31■□□□□ 0.2
CASQ1P31415 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms