Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.35■□□□□ 0.05
CCND1P24385 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CCND1P24385 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.35■□□□□ 0.05
CCND1P24385 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CCND1P24385 AC018892.3-201ENST00000623986 2499 ntBASIC15.35■□□□□ 0.05
CCND1P24385 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CCND1P24385 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.35■□□□□ 0.05
CCND1P24385 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.35■□□□□ 0.05
CCND1P24385 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.35■□□□□ 0.05
CCND1P24385 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.35■□□□□ 0.05
CCND1P24385 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCND1P24385 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCND1P24385 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.35■□□□□ 0.05
CCND1P24385 RN7SL618P-201ENST00000477850 296 ntBASIC15.35■□□□□ 0.05
CCND1P24385 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.35■□□□□ 0.05
CCND1P24385 AC027369.6-201ENST00000525520 931 ntBASIC15.35■□□□□ 0.05
CCND1P24385 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.35■□□□□ 0.05
CCND1P24385 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.35■□□□□ 0.05
CCND1P24385 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCND1P24385 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CCND1P24385 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.35■□□□□ 0.05
CCND1P24385 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.35■□□□□ 0.05
CCND1P24385 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCND1P24385 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.34■□□□□ 0.05
CCND1P24385 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.34■□□□□ 0.05
CCND1P24385 AC011474.4-201ENST00000623523 2076 ntBASIC15.34■□□□□ 0.05
CCND1P24385 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.34■□□□□ 0.05
CCND1P24385 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.34■□□□□ 0.05
CCND1P24385 AC092183.1-201ENST00000469884 875 ntBASIC15.34■□□□□ 0.05
CCND1P24385 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.34■□□□□ 0.05
CCND1P24385 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.34■□□□□ 0.05
CCND1P24385 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.34■□□□□ 0.05
CCND1P24385 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.34■□□□□ 0.05
CCND1P24385 AC097359.3-201ENST00000603982 1210 ntBASIC15.34■□□□□ 0.05
CCND1P24385 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.34■□□□□ 0.05
CCND1P24385 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CCND1P24385 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.34■□□□□ 0.05
CCND1P24385 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CCND1P24385 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.34■□□□□ 0.05
CCND1P24385 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CCND1P24385 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CCND1P24385 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CCND1P24385 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.34■□□□□ 0.05
CCND1P24385 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
CCND1P24385 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CCND1P24385 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.34■□□□□ 0.05
CCND1P24385 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCND1P24385 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CCND1P24385 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.34■□□□□ 0.05
CCND1P24385 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CCND1P24385 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.34■□□□□ 0.05
CCND1P24385 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.33■□□□□ 0.05
CCND1P24385 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
CCND1P24385 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCND1P24385 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCND1P24385 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCND1P24385 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms