Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC020914.3-201ENST00000594712 304 ntBASIC17.55■□□□□ 0.4
ERCC3P19447 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.55■□□□□ 0.4
ERCC3P19447 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
ERCC3P19447 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.55■□□□□ 0.4
ERCC3P19447 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC3P19447 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC3P19447 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC3P19447 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC3P19447 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.55■□□□□ 0.4
ERCC3P19447 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC3P19447 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.55■□□□□ 0.4
ERCC3P19447 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.55■□□□□ 0.4
ERCC3P19447 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.55■□□□□ 0.4
ERCC3P19447 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC3P19447 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERCC3P19447 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.54■□□□□ 0.4
ERCC3P19447 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERCC3P19447 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ERCC3P19447 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERCC3P19447 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.54■□□□□ 0.4
ERCC3P19447 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERCC3P19447 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ERCC3P19447 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ERCC3P19447 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.54■□□□□ 0.4
ERCC3P19447 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
ERCC3P19447 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ERCC3P19447 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ERCC3P19447 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ERCC3P19447 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERCC3P19447 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ERCC3P19447 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.54■□□□□ 0.4
ERCC3P19447 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERCC3P19447 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.54■□□□□ 0.4
ERCC3P19447 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ERCC3P19447 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.54■□□□□ 0.4
ERCC3P19447 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.54■□□□□ 0.4
ERCC3P19447 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.54■□□□□ 0.4
ERCC3P19447 EIF3FP3-201ENST00000434851 1086 ntBASIC17.54■□□□□ 0.4
ERCC3P19447 FAM8A4P-201ENST00000435433 1213 ntBASIC17.54■□□□□ 0.4
ERCC3P19447 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ERCC3P19447 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ERCC3P19447 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.54■□□□□ 0.4
ERCC3P19447 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.54■□□□□ 0.4
ERCC3P19447 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERCC3P19447 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERCC3P19447 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.54■□□□□ 0.4
ERCC3P19447 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ERCC3P19447 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.54■□□□□ 0.4
ERCC3P19447 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.54■□□□□ 0.4
ERCC3P19447 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ERCC3P19447 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
ERCC3P19447 LINC02228-204ENST00000642115 2962 ntBASIC17.54■□□□□ 0.4
ERCC3P19447 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERCC3P19447 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ERCC3P19447 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.54■□□□□ 0.4
ERCC3P19447 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ERCC3P19447 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.54■□□□□ 0.4
ERCC3P19447 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ERCC3P19447 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERCC3P19447 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERCC3P19447 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ERCC3P19447 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ERCC3P19447 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.53■□□□□ 0.4
ERCC3P19447 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.53■□□□□ 0.4
ERCC3P19447 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.53■□□□□ 0.4
ERCC3P19447 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ERCC3P19447 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERCC3P19447 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ERCC3P19447 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.53■□□□□ 0.4
ERCC3P19447 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ERCC3P19447 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERCC3P19447 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERCC3P19447 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERCC3P19447 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERCC3P19447 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERCC3P19447 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.53■□□□□ 0.4
ERCC3P19447 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.53■□□□□ 0.4
ERCC3P19447 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.53■□□□□ 0.4
ERCC3P19447 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.53■□□□□ 0.4
ERCC3P19447 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.53■□□□□ 0.4
ERCC3P19447 POM121L10P-201ENST00000436994 1285 ntBASIC17.53■□□□□ 0.4
ERCC3P19447 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.53■□□□□ 0.4
ERCC3P19447 AC005077.2-201ENST00000449786 690 ntBASIC17.53■□□□□ 0.4
ERCC3P19447 HIST2H2BC-201ENST00000498492 580 ntBASIC17.53■□□□□ 0.4
ERCC3P19447 COX5BP1-201ENST00000507622 393 ntBASIC17.53■□□□□ 0.4
ERCC3P19447 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
ERCC3P19447 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.53■□□□□ 0.4
ERCC3P19447 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.53■□□□□ 0.4
ERCC3P19447 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.53■□□□□ 0.4
ERCC3P19447 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.53■□□□□ 0.4
ERCC3P19447 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.53■□□□□ 0.4
ERCC3P19447 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERCC3P19447 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ERCC3P19447 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ERCC3P19447 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERCC3P19447 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERCC3P19447 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ERCC3P19447 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
ERCC3P19447 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ERCC3P19447 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms