Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NCK1P16333 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NCK1P16333 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.37□□□□□ -0.11
NCK1P16333 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
NCK1P16333 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NCK1P16333 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.37□□□□□ -0.11
NCK1P16333 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.37□□□□□ -0.11
NCK1P16333 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NCK1P16333 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
NCK1P16333 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.37□□□□□ -0.11
NCK1P16333 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NCK1P16333 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.37□□□□□ -0.11
NCK1P16333 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NCK1P16333 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NCK1P16333 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 FAM58DP-201ENST00000428076 619 ntBASIC14.37□□□□□ -0.11
NCK1P16333 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NCK1P16333 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.37□□□□□ -0.11
NCK1P16333 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.37□□□□□ -0.11
NCK1P16333 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.37□□□□□ -0.11
NCK1P16333 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.37□□□□□ -0.11
NCK1P16333 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NCK1P16333 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NCK1P16333 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.37□□□□□ -0.11
NCK1P16333 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.37□□□□□ -0.11
NCK1P16333 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.37□□□□□ -0.11
NCK1P16333 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.37□□□□□ -0.11
NCK1P16333 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.37□□□□□ -0.11
NCK1P16333 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.37□□□□□ -0.11
NCK1P16333 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.37□□□□□ -0.11
NCK1P16333 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NCK1P16333 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.36□□□□□ -0.11
NCK1P16333 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.36□□□□□ -0.11
NCK1P16333 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.36□□□□□ -0.11
NCK1P16333 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NCK1P16333 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NCK1P16333 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 AL359881.3-201ENST00000602640 1721 ntBASIC14.36□□□□□ -0.11
NCK1P16333 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
NCK1P16333 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NCK1P16333 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.36□□□□□ -0.11
NCK1P16333 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 AC005237.2-201ENST00000434368 219 ntBASIC14.36□□□□□ -0.11
NCK1P16333 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.36□□□□□ -0.11
NCK1P16333 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.36□□□□□ -0.11
NCK1P16333 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.36□□□□□ -0.11
NCK1P16333 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.36□□□□□ -0.11
NCK1P16333 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.36□□□□□ -0.11
NCK1P16333 KRT126P-201ENST00000549467 1181 ntBASIC14.36□□□□□ -0.11
NCK1P16333 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.36□□□□□ -0.11
NCK1P16333 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.36□□□□□ -0.11
NCK1P16333 AL645728.2-202ENST00000641679 227 ntBASIC14.36□□□□□ -0.11
NCK1P16333 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.36□□□□□ -0.11
NCK1P16333 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.36□□□□□ -0.11
NCK1P16333 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.36□□□□□ -0.11
NCK1P16333 AC023090.2-201ENST00000625182 2110 ntBASIC14.36□□□□□ -0.11
NCK1P16333 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.36□□□□□ -0.11
NCK1P16333 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCK1P16333 AC126335.2-201ENST00000623362 4637 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms