Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
DEFA4P12838 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
DEFA4P12838 SPDYE17-201ENST00000412399 783 ntBASIC12.42□□□□□ -0.42
DEFA4P12838 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.42□□□□□ -0.42
DEFA4P12838 CNN2P2-201ENST00000443536 909 ntBASIC12.42□□□□□ -0.42
DEFA4P12838 CNN2P3-201ENST00000450201 906 ntBASIC12.42□□□□□ -0.42
DEFA4P12838 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.42□□□□□ -0.42
DEFA4P12838 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 AC025678.2-201ENST00000562061 970 ntBASIC12.42□□□□□ -0.42
DEFA4P12838 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.42□□□□□ -0.42
DEFA4P12838 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
DEFA4P12838 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.42□□□□□ -0.42
DEFA4P12838 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.42□□□□□ -0.42
DEFA4P12838 AL136317.3-201ENST00000618497 906 ntBASIC12.42□□□□□ -0.42
DEFA4P12838 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
DEFA4P12838 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.42□□□□□ -0.42
DEFA4P12838 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.42□□□□□ -0.42
DEFA4P12838 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
DEFA4P12838 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.42□□□□□ -0.42
DEFA4P12838 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.42□□□□□ -0.42
DEFA4P12838 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
DEFA4P12838 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
DEFA4P12838 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
DEFA4P12838 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
DEFA4P12838 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
DEFA4P12838 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.41□□□□□ -0.42
DEFA4P12838 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
DEFA4P12838 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.41□□□□□ -0.42
DEFA4P12838 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
DEFA4P12838 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.41□□□□□ -0.42
DEFA4P12838 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.41□□□□□ -0.42
DEFA4P12838 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
DEFA4P12838 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.41□□□□□ -0.42
DEFA4P12838 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.41□□□□□ -0.42
DEFA4P12838 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.41□□□□□ -0.42
DEFA4P12838 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
DEFA4P12838 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.41□□□□□ -0.42
DEFA4P12838 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.41□□□□□ -0.42
DEFA4P12838 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.41□□□□□ -0.42
DEFA4P12838 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
DEFA4P12838 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.41□□□□□ -0.42
DEFA4P12838 AC136604.1-201ENST00000418535 575 ntBASIC12.41□□□□□ -0.42
DEFA4P12838 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.41□□□□□ -0.42
DEFA4P12838 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
DEFA4P12838 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 BANF1P1-201ENST00000553684 263 ntBASIC12.41□□□□□ -0.42
DEFA4P12838 AL079307.3-201ENST00000556114 283 ntBASIC12.41□□□□□ -0.42
DEFA4P12838 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.41□□□□□ -0.42
DEFA4P12838 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.41□□□□□ -0.42
DEFA4P12838 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.41□□□□□ -0.42
DEFA4P12838 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.41□□□□□ -0.42
DEFA4P12838 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.41□□□□□ -0.42
DEFA4P12838 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.41□□□□□ -0.42
DEFA4P12838 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
DEFA4P12838 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
DEFA4P12838 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
DEFA4P12838 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.41□□□□□ -0.42
DEFA4P12838 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.41□□□□□ -0.42
DEFA4P12838 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms