Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.75□□□□□ -0.21
FREM3P0C091 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
FREM3P0C091 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
FREM3P0C091 AC006058.4-201ENST00000624016 1670 ntBASIC13.75□□□□□ -0.21
FREM3P0C091 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.75□□□□□ -0.21
FREM3P0C091 ACKR1-201ENST00000368121 1240 ntBASIC13.75□□□□□ -0.21
FREM3P0C091 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
FREM3P0C091 AC092933.1-201ENST00000393644 945 ntBASIC13.75□□□□□ -0.21
FREM3P0C091 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
FREM3P0C091 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.75□□□□□ -0.21
FREM3P0C091 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.75□□□□□ -0.21
FREM3P0C091 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.75□□□□□ -0.21
FREM3P0C091 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.75□□□□□ -0.21
FREM3P0C091 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
FREM3P0C091 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
FREM3P0C091 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.74□□□□□ -0.21
FREM3P0C091 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
FREM3P0C091 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
FREM3P0C091 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
FREM3P0C091 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
FREM3P0C091 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 CICP23-201ENST00000605013 2741 ntBASIC13.74□□□□□ -0.21
FREM3P0C091 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.74□□□□□ -0.21
FREM3P0C091 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.74□□□□□ -0.21
FREM3P0C091 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
FREM3P0C091 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
FREM3P0C091 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
FREM3P0C091 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.74□□□□□ -0.21
FREM3P0C091 AL583810.1-201ENST00000553344 1045 ntBASIC13.74□□□□□ -0.21
FREM3P0C091 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.74□□□□□ -0.21
FREM3P0C091 RN7SL713P-201ENST00000582127 302 ntBASIC13.74□□□□□ -0.21
FREM3P0C091 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.74□□□□□ -0.21
FREM3P0C091 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.74□□□□□ -0.21
FREM3P0C091 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.74□□□□□ -0.21
FREM3P0C091 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.74□□□□□ -0.21
FREM3P0C091 INE2-201ENST00000630399 1874 ntBASIC13.74□□□□□ -0.21
FREM3P0C091 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.74□□□□□ -0.21
FREM3P0C091 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
FREM3P0C091 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.74□□□□□ -0.21
FREM3P0C091 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.74□□□□□ -0.21
FREM3P0C091 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
FREM3P0C091 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
FREM3P0C091 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.74□□□□□ -0.21
FREM3P0C091 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
FREM3P0C091 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.73□□□□□ -0.21
FREM3P0C091 ZBED1P1-201ENST00000502364 1930 ntBASIC13.73□□□□□ -0.21
FREM3P0C091 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 MIR326-201ENST00000362220 95 ntBASIC13.73□□□□□ -0.21
FREM3P0C091 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.73□□□□□ -0.21
FREM3P0C091 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.73□□□□□ -0.21
FREM3P0C091 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.73□□□□□ -0.21
FREM3P0C091 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.73□□□□□ -0.21
FREM3P0C091 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.73□□□□□ -0.21
FREM3P0C091 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
FREM3P0C091 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.73□□□□□ -0.21
FREM3P0C091 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 LINC00552-201ENST00000625151 2579 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms