Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3DP05423 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
POLR3DP05423 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3DP05423 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
POLR3DP05423 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3DP05423 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3DP05423 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC18.1■□□□□ 0.49
POLR3DP05423 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3DP05423 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
POLR3DP05423 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
POLR3DP05423 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
POLR3DP05423 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.1■□□□□ 0.49
POLR3DP05423 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.1■□□□□ 0.49
POLR3DP05423 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3DP05423 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
POLR3DP05423 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.1■□□□□ 0.49
POLR3DP05423 CD8B2-202ENST00000417670 633 ntBASIC18.1■□□□□ 0.49
POLR3DP05423 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3DP05423 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.1■□□□□ 0.49
POLR3DP05423 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3DP05423 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.1■□□□□ 0.49
POLR3DP05423 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
POLR3DP05423 RPL13AP20-201ENST00000459725 609 ntBASIC18.1■□□□□ 0.49
POLR3DP05423 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.1■□□□□ 0.49
POLR3DP05423 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.1■□□□□ 0.49
POLR3DP05423 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3DP05423 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3DP05423 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3DP05423 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3DP05423 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3DP05423 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.09■□□□□ 0.49
POLR3DP05423 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
POLR3DP05423 AC006058.4-201ENST00000624016 1670 ntBASIC18.09■□□□□ 0.49
POLR3DP05423 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3DP05423 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR3DP05423 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3DP05423 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
POLR3DP05423 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3DP05423 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3DP05423 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3DP05423 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3DP05423 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.09■□□□□ 0.49
POLR3DP05423 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR3DP05423 HLA-K-203ENST00000430151 1046 ntBASIC18.09■□□□□ 0.49
POLR3DP05423 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR3DP05423 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR3DP05423 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR3DP05423 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR3DP05423 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.09■□□□□ 0.49
POLR3DP05423 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR3DP05423 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
POLR3DP05423 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR3DP05423 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR3DP05423 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3DP05423 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3DP05423 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3DP05423 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3DP05423 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3DP05423 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.08■□□□□ 0.49
POLR3DP05423 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.08■□□□□ 0.49
POLR3DP05423 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR3DP05423 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR3DP05423 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.08■□□□□ 0.49
POLR3DP05423 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR3DP05423 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR3DP05423 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.08■□□□□ 0.49
POLR3DP05423 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.08■□□□□ 0.49
POLR3DP05423 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR3DP05423 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.08■□□□□ 0.49
POLR3DP05423 AL157414.3-201ENST00000624276 1954 ntBASIC18.08■□□□□ 0.49
POLR3DP05423 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
POLR3DP05423 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
POLR3DP05423 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
POLR3DP05423 TCAF2P1-201ENST00000291129 2421 ntBASIC18.08■□□□□ 0.49
POLR3DP05423 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR3DP05423 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
POLR3DP05423 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3DP05423 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.08■□□□□ 0.48
POLR3DP05423 GHSR-202ENST00000427970 912 ntBASIC18.08■□□□□ 0.48
POLR3DP05423 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3DP05423 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.08■□□□□ 0.48
POLR3DP05423 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.08■□□□□ 0.48
POLR3DP05423 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.08■□□□□ 0.48
POLR3DP05423 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.08■□□□□ 0.48
POLR3DP05423 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.08■□□□□ 0.48
POLR3DP05423 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.08■□□□□ 0.48
POLR3DP05423 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.08■□□□□ 0.48
POLR3DP05423 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
POLR3DP05423 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3DP05423 AC055811.4-201ENST00000624039 1754 ntBASIC18.08■□□□□ 0.48
POLR3DP05423 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
POLR3DP05423 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3DP05423 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.08■□□□□ 0.48
POLR3DP05423 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
POLR3DP05423 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3DP05423 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3DP05423 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3DP05423 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3DP05423 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.08■□□□□ 0.48
POLR3DP05423 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms