Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
CHGBP05060 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.12■□□□□ 0.49
CHGBP05060 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.12■□□□□ 0.49
CHGBP05060 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.12■□□□□ 0.49
CHGBP05060 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CHGBP05060 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CHGBP05060 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHGBP05060 AC003102.2-201ENST00000589195 1469 ntBASIC18.12■□□□□ 0.49
CHGBP05060 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.12■□□□□ 0.49
CHGBP05060 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.12■□□□□ 0.49
CHGBP05060 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.12■□□□□ 0.49
CHGBP05060 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHGBP05060 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
CHGBP05060 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHGBP05060 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHGBP05060 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.11■□□□□ 0.49
CHGBP05060 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.11■□□□□ 0.49
CHGBP05060 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC18.11■□□□□ 0.49
CHGBP05060 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.11■□□□□ 0.49
CHGBP05060 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CHGBP05060 AC139749.1-202ENST00000617529 3139 ntBASIC18.11■□□□□ 0.49
CHGBP05060 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHGBP05060 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHGBP05060 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CHGBP05060 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CHGBP05060 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CHGBP05060 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.11■□□□□ 0.49
CHGBP05060 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHGBP05060 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CHGBP05060 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC18.11■□□□□ 0.49
CHGBP05060 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHGBP05060 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.11■□□□□ 0.49
CHGBP05060 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHGBP05060 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.11■□□□□ 0.49
CHGBP05060 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.11■□□□□ 0.49
CHGBP05060 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.11■□□□□ 0.49
CHGBP05060 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CHGBP05060 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CHGBP05060 AL354989.2-201ENST00000435838 1540 ntBASIC18.11■□□□□ 0.49
CHGBP05060 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.11■□□□□ 0.49
CHGBP05060 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.11■□□□□ 0.49
CHGBP05060 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHGBP05060 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.11■□□□□ 0.49
CHGBP05060 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CHGBP05060 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.11■□□□□ 0.49
CHGBP05060 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHGBP05060 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHGBP05060 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHGBP05060 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHGBP05060 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CHGBP05060 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC18.1■□□□□ 0.49
CHGBP05060 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.1■□□□□ 0.49
CHGBP05060 AC018442.1-201ENST00000421439 2061 ntBASIC18.1■□□□□ 0.49
CHGBP05060 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHGBP05060 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.1■□□□□ 0.49
CHGBP05060 AHCYP2-201ENST00000430630 1300 ntBASIC18.1■□□□□ 0.49
CHGBP05060 FKBP4P6-201ENST00000457486 1332 ntBASIC18.1■□□□□ 0.49
CHGBP05060 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.1■□□□□ 0.49
CHGBP05060 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHGBP05060 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.1■□□□□ 0.49
CHGBP05060 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.1■□□□□ 0.49
CHGBP05060 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.1■□□□□ 0.49
CHGBP05060 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.1■□□□□ 0.49
CHGBP05060 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CHGBP05060 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHGBP05060 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHGBP05060 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CHGBP05060 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms