Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
OPN1SWP03999 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.22□□□□□ -0.13
OPN1SWP03999 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
OPN1SWP03999 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.22□□□□□ -0.13
OPN1SWP03999 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.22□□□□□ -0.13
OPN1SWP03999 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
OPN1SWP03999 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
OPN1SWP03999 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 AC125807.1-201ENST00000483097 614 ntBASIC14.22□□□□□ -0.13
OPN1SWP03999 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.22□□□□□ -0.13
OPN1SWP03999 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.22□□□□□ -0.13
OPN1SWP03999 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.22□□□□□ -0.13
OPN1SWP03999 AC044860.1-202ENST00000559481 777 ntBASIC14.22□□□□□ -0.13
OPN1SWP03999 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.22□□□□□ -0.13
OPN1SWP03999 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.22□□□□□ -0.13
OPN1SWP03999 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.22□□□□□ -0.13
OPN1SWP03999 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
OPN1SWP03999 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.22□□□□□ -0.13
OPN1SWP03999 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.22□□□□□ -0.13
OPN1SWP03999 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.22□□□□□ -0.13
OPN1SWP03999 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
OPN1SWP03999 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.22□□□□□ -0.13
OPN1SWP03999 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
OPN1SWP03999 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.21□□□□□ -0.13
OPN1SWP03999 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
OPN1SWP03999 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
OPN1SWP03999 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
OPN1SWP03999 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
OPN1SWP03999 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.21□□□□□ -0.13
OPN1SWP03999 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
OPN1SWP03999 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
OPN1SWP03999 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
OPN1SWP03999 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
OPN1SWP03999 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
OPN1SWP03999 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
OPN1SWP03999 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
OPN1SWP03999 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
OPN1SWP03999 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.21□□□□□ -0.13
OPN1SWP03999 AP006288.1-201ENST00000446065 395 ntBASIC14.21□□□□□ -0.13
OPN1SWP03999 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
OPN1SWP03999 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
OPN1SWP03999 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.21□□□□□ -0.13
OPN1SWP03999 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
OPN1SWP03999 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.21□□□□□ -0.13
OPN1SWP03999 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
OPN1SWP03999 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.21□□□□□ -0.13
OPN1SWP03999 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
OPN1SWP03999 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
OPN1SWP03999 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
OPN1SWP03999 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
OPN1SWP03999 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
OPN1SWP03999 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.21□□□□□ -0.13
OPN1SWP03999 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
OPN1SWP03999 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
OPN1SWP03999 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
OPN1SWP03999 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.21□□□□□ -0.14
OPN1SWP03999 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
OPN1SWP03999 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
OPN1SWP03999 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
OPN1SWP03999 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
OPN1SWP03999 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
OPN1SWP03999 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
OPN1SWP03999 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
OPN1SWP03999 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OPN1SWP03999 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.2□□□□□ -0.14
OPN1SWP03999 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
OPN1SWP03999 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
OPN1SWP03999 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
OPN1SWP03999 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OPN1SWP03999 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OPN1SWP03999 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.2□□□□□ -0.14
OPN1SWP03999 TUBB3P1-201ENST00000405796 1332 ntBASIC14.2□□□□□ -0.14
OPN1SWP03999 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
OPN1SWP03999 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OPN1SWP03999 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OPN1SWP03999 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OPN1SWP03999 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
OPN1SWP03999 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OPN1SWP03999 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
OPN1SWP03999 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
OPN1SWP03999 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
OPN1SWP03999 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
OPN1SWP03999 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.2□□□□□ -0.14
OPN1SWP03999 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms