Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
KRT6AP02538 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.75□□□□□ -0.05
KRT6AP02538 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT6AP02538 AC055876.3-201ENST00000431496 288 ntBASIC14.75□□□□□ -0.05
KRT6AP02538 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.75□□□□□ -0.05
KRT6AP02538 AL512638.1-201ENST00000457493 794 ntBASIC14.75□□□□□ -0.05
KRT6AP02538 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.75□□□□□ -0.05
KRT6AP02538 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT6AP02538 AC138649.4-201ENST00000612222 287 ntBASIC14.75□□□□□ -0.05
KRT6AP02538 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
KRT6AP02538 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
KRT6AP02538 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT6AP02538 AC022144.1-201ENST00000602255 1580 ntBASIC14.75□□□□□ -0.05
KRT6AP02538 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
KRT6AP02538 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT6AP02538 AC023908.3-201ENST00000564211 3047 ntBASIC14.75□□□□□ -0.05
KRT6AP02538 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
KRT6AP02538 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
KRT6AP02538 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
KRT6AP02538 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT6AP02538 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.75□□□□□ -0.05
KRT6AP02538 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.75□□□□□ -0.05
KRT6AP02538 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
KRT6AP02538 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
KRT6AP02538 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.74□□□□□ -0.05
KRT6AP02538 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.74□□□□□ -0.05
KRT6AP02538 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
KRT6AP02538 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.74□□□□□ -0.05
KRT6AP02538 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
KRT6AP02538 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
KRT6AP02538 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 AC140479.7-201ENST00000636301 2332 ntBASIC14.74□□□□□ -0.05
KRT6AP02538 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
KRT6AP02538 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.74□□□□□ -0.05
KRT6AP02538 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.74□□□□□ -0.05
KRT6AP02538 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.74□□□□□ -0.05
KRT6AP02538 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.74□□□□□ -0.05
KRT6AP02538 GAPDHP40-201ENST00000505218 1006 ntBASIC14.74□□□□□ -0.05
KRT6AP02538 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.74□□□□□ -0.05
KRT6AP02538 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.74□□□□□ -0.05
KRT6AP02538 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.74□□□□□ -0.05
KRT6AP02538 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
KRT6AP02538 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.74□□□□□ -0.05
KRT6AP02538 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.74□□□□□ -0.05
KRT6AP02538 AL391069.4-201ENST00000609583 481 ntBASIC14.74□□□□□ -0.05
KRT6AP02538 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.74□□□□□ -0.05
KRT6AP02538 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.74□□□□□ -0.05
KRT6AP02538 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
KRT6AP02538 AC005089.1-201ENST00000619486 2241 ntBASIC14.74□□□□□ -0.05
KRT6AP02538 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 CLK3P2-201ENST00000427566 1453 ntBASIC14.74□□□□□ -0.05
KRT6AP02538 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.74□□□□□ -0.05
KRT6AP02538 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.74□□□□□ -0.05
KRT6AP02538 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
KRT6AP02538 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT6AP02538 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT6AP02538 AC018442.1-201ENST00000421439 2061 ntBASIC14.73□□□□□ -0.05
KRT6AP02538 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT6AP02538 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
KRT6AP02538 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KRT6AP02538 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT6AP02538 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT6AP02538 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT6AP02538 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT6AP02538 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms