Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBC1P01850 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBC1P01850 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBC1P01850 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBC1P01850 AC023090.2-201ENST00000625182 2110 ntBASIC15.17■□□□□ 0.02
TRBC1P01850 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBC1P01850 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBC1P01850 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBC1P01850 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
TRBC1P01850 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBC1P01850 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBC1P01850 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBC1P01850 PCDHA3-202ENST00000532566 4594 ntBASIC15.17■□□□□ 0.02
TRBC1P01850 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBC1P01850 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRBC1P01850 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBC1P01850 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRBC1P01850 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRBC1P01850 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TRBC1P01850 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBC1P01850 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBC1P01850 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
TRBC1P01850 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TRBC1P01850 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBC1P01850 ARSEP1-201ENST00000420443 635 ntBASIC15.16■□□□□ 0.02
TRBC1P01850 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBC1P01850 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBC1P01850 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBC1P01850 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBC1P01850 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBC1P01850 AP000812.2-201ENST00000538934 718 ntBASIC15.16■□□□□ 0.02
TRBC1P01850 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBC1P01850 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBC1P01850 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBC1P01850 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRBC1P01850 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRBC1P01850 AC004466.1-201ENST00000599515 1080 ntBASIC15.16■□□□□ 0.02
TRBC1P01850 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBC1P01850 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
TRBC1P01850 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBC1P01850 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBC1P01850 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBC1P01850 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBC1P01850 AJ011931.1-201ENST00000618749 2492 ntBASIC15.16■□□□□ 0.02
TRBC1P01850 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRBC1P01850 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBC1P01850 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBC1P01850 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBC1P01850 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRBC1P01850 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBC1P01850 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBC1P01850 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBC1P01850 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRBC1P01850 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBC1P01850 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBC1P01850 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBC1P01850 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBC1P01850 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBC1P01850 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBC1P01850 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
TRBC1P01850 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBC1P01850 POM121L8P-201ENST00000417732 1281 ntBASIC15.15■□□□□ 0.02
TRBC1P01850 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.15■□□□□ 0.02
TRBC1P01850 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.15■□□□□ 0.02
TRBC1P01850 FAM197Y7-201ENST00000432892 766 ntBASIC15.15■□□□□ 0.02
TRBC1P01850 RPL7P3-201ENST00000441388 714 ntBASIC15.15■□□□□ 0.02
TRBC1P01850 POM121L9P-203ENST00000441984 1285 ntBASIC15.15■□□□□ 0.02
TRBC1P01850 FO681548.1-201ENST00000455617 1132 ntBASIC15.15■□□□□ 0.02
TRBC1P01850 RNA5SP486-201ENST00000515961 83 ntBASIC15.15■□□□□ 0.02
TRBC1P01850 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
TRBC1P01850 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRBC1P01850 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRBC1P01850 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.15■□□□□ 0.02
TRBC1P01850 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBC1P01850 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBC1P01850 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBC1P01850 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBC1P01850 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBC1P01850 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms