Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RFPL1O75677 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFPL1O75677 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RFPL1O75677 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFPL1O75677 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFPL1O75677 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFPL1O75677 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFPL1O75677 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RFPL1O75677 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.24■□□□□ 0.03
RFPL1O75677 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFPL1O75677 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RFPL1O75677 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RFPL1O75677 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 AL360270.3-201ENST00000609118 1348 ntBASIC15.23■□□□□ 0.03
RFPL1O75677 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RFPL1O75677 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 AC092135.3-201ENST00000624151 1846 ntBASIC15.23■□□□□ 0.03
RFPL1O75677 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RFPL1O75677 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RFPL1O75677 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.23■□□□□ 0.03
RFPL1O75677 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.23■□□□□ 0.03
RFPL1O75677 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.23■□□□□ 0.03
RFPL1O75677 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RFPL1O75677 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.23■□□□□ 0.03
RFPL1O75677 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RFPL1O75677 AL512361.1-201ENST00000554200 418 ntBASIC15.23■□□□□ 0.03
RFPL1O75677 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.23■□□□□ 0.03
RFPL1O75677 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.23■□□□□ 0.03
RFPL1O75677 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.23■□□□□ 0.03
RFPL1O75677 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.23■□□□□ 0.03
RFPL1O75677 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.23■□□□□ 0.03
RFPL1O75677 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.23■□□□□ 0.03
RFPL1O75677 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.23■□□□□ 0.03
RFPL1O75677 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.23■□□□□ 0.03
RFPL1O75677 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.23■□□□□ 0.03
RFPL1O75677 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.23■□□□□ 0.03
RFPL1O75677 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.23■□□□□ 0.03
RFPL1O75677 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.23■□□□□ 0.03
RFPL1O75677 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.23■□□□□ 0.03
RFPL1O75677 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
RFPL1O75677 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
RFPL1O75677 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.23■□□□□ 0.03
RFPL1O75677 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.23■□□□□ 0.03
RFPL1O75677 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
RFPL1O75677 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RFPL1O75677 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFPL1O75677 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFPL1O75677 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.22■□□□□ 0.03
RFPL1O75677 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFPL1O75677 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFPL1O75677 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.22■□□□□ 0.03
RFPL1O75677 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFPL1O75677 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFPL1O75677 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFPL1O75677 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFPL1O75677 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.22■□□□□ 0.03
RFPL1O75677 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.22■□□□□ 0.03
RFPL1O75677 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFPL1O75677 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RFPL1O75677 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RFPL1O75677 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFPL1O75677 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFPL1O75677 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFPL1O75677 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
RFPL1O75677 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFPL1O75677 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFPL1O75677 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.22■□□□□ 0.03
RFPL1O75677 ARSEP1-201ENST00000420443 635 ntBASIC15.22■□□□□ 0.03
RFPL1O75677 HLA-V-201ENST00000429037 534 ntBASIC15.22■□□□□ 0.03
RFPL1O75677 DFFBP1-201ENST00000433250 979 ntBASIC15.22■□□□□ 0.03
RFPL1O75677 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.22■□□□□ 0.03
RFPL1O75677 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.22■□□□□ 0.03
RFPL1O75677 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.22■□□□□ 0.03
RFPL1O75677 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.22■□□□□ 0.03
RFPL1O75677 AC135586.1-201ENST00000539323 574 ntBASIC15.22■□□□□ 0.03
RFPL1O75677 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFPL1O75677 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.22■□□□□ 0.03
RFPL1O75677 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.22■□□□□ 0.03
RFPL1O75677 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFPL1O75677 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms