Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC6.55□□□□□ -1.36
USH2AO75445 MYL6-215ENST00000549566 685 ntTSL 2 BASIC6.55□□□□□ -1.36
USH2AO75445 AC007250.1-201ENST00000608934 338 ntBASIC6.55□□□□□ -1.36
USH2AO75445 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 AL360270.3-201ENST00000609118 1348 ntBASIC6.55□□□□□ -1.36
USH2AO75445 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC6.55□□□□□ -1.36
USH2AO75445 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC6.55□□□□□ -1.36
USH2AO75445 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
USH2AO75445 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
USH2AO75445 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
USH2AO75445 RNASEH2CP1-201ENST00000454281 502 ntBASIC6.55□□□□□ -1.36
USH2AO75445 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC6.55□□□□□ -1.36
USH2AO75445 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC6.55□□□□□ -1.36
USH2AO75445 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 FUCA1P1-201ENST00000374476 1351 ntBASIC6.55□□□□□ -1.36
USH2AO75445 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
USH2AO75445 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
USH2AO75445 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC6.54□□□□□ -1.36
USH2AO75445 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 AC010491.1-201ENST00000563101 2797 ntBASIC6.54□□□□□ -1.36
USH2AO75445 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 DBET-201ENST00000630918 3363 ntBASIC6.54□□□□□ -1.36
USH2AO75445 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 HNRNPA1P2-207ENST00000432375 960 ntBASIC6.54□□□□□ -1.36
USH2AO75445 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 CICP12-201ENST00000455801 843 ntBASIC6.54□□□□□ -1.36
USH2AO75445 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 ALG1L15P-201ENST00000482834 794 ntBASIC6.54□□□□□ -1.36
USH2AO75445 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC6.54□□□□□ -1.36
USH2AO75445 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
USH2AO75445 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC6.54□□□□□ -1.36
USH2AO75445 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 MSANTD2P1-201ENST00000445341 1368 ntBASIC6.54□□□□□ -1.36
USH2AO75445 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC6.54□□□□□ -1.36
USH2AO75445 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC6.54□□□□□ -1.36
USH2AO75445 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USH2AO75445 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms