Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PRAMEF2O60811 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.27□□□□□ -0.12
PRAMEF2O60811 AC134312.5-201ENST00000568031 1313 ntBASIC14.27□□□□□ -0.12
PRAMEF2O60811 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PRAMEF2O60811 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PRAMEF2O60811 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.27□□□□□ -0.13
PRAMEF2O60811 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.27□□□□□ -0.13
PRAMEF2O60811 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PRAMEF2O60811 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
PRAMEF2O60811 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.27□□□□□ -0.13
PRAMEF2O60811 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.27□□□□□ -0.13
PRAMEF2O60811 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.27□□□□□ -0.13
PRAMEF2O60811 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.27□□□□□ -0.13
PRAMEF2O60811 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.27□□□□□ -0.13
PRAMEF2O60811 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.27□□□□□ -0.13
PRAMEF2O60811 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 ZBED1P1-201ENST00000502364 1930 ntBASIC14.27□□□□□ -0.13
PRAMEF2O60811 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.27□□□□□ -0.13
PRAMEF2O60811 AL009178.2-201ENST00000597278 2719 ntBASIC14.27□□□□□ -0.13
PRAMEF2O60811 OR2I1P-209ENST00000641730 5365 ntBASIC14.27□□□□□ -0.13
PRAMEF2O60811 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PRAMEF2O60811 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
PRAMEF2O60811 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRAMEF2O60811 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 AP000845.1-201ENST00000581677 2131 ntBASIC14.26□□□□□ -0.13
PRAMEF2O60811 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 AGAP7P-201ENST00000582299 2062 ntBASIC14.26□□□□□ -0.13
PRAMEF2O60811 AGAP14-201ENST00000624701 2060 ntBASIC14.26□□□□□ -0.13
PRAMEF2O60811 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PRAMEF2O60811 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRAMEF2O60811 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PRAMEF2O60811 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PRAMEF2O60811 RPL7P3-201ENST00000441388 714 ntBASIC14.26□□□□□ -0.13
PRAMEF2O60811 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 AC012441.1-201ENST00000446669 685 ntBASIC14.26□□□□□ -0.13
PRAMEF2O60811 AP001582.1-201ENST00000525856 295 ntBASIC14.26□□□□□ -0.13
PRAMEF2O60811 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 AC005252.2-201ENST00000624630 1141 ntBASIC14.26□□□□□ -0.13
PRAMEF2O60811 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRAMEF2O60811 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRAMEF2O60811 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRAMEF2O60811 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PRAMEF2O60811 AL158070.2-201ENST00000623713 1621 ntBASIC14.26□□□□□ -0.13
PRAMEF2O60811 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PRAMEF2O60811 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PRAMEF2O60811 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRAMEF2O60811 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRAMEF2O60811 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.25□□□□□ -0.13
PRAMEF2O60811 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.25□□□□□ -0.13
PRAMEF2O60811 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRAMEF2O60811 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PRAMEF2O60811 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRAMEF2O60811 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRAMEF2O60811 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRAMEF2O60811 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRAMEF2O60811 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRAMEF2O60811 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRAMEF2O60811 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.25□□□□□ -0.13
PRAMEF2O60811 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms