Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
LCMT2O60294 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LCMT2O60294 AC005229.1-201ENST00000392885 409 ntBASIC14.5□□□□□ -0.09
LCMT2O60294 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
LCMT2O60294 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.5□□□□□ -0.09
LCMT2O60294 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.5□□□□□ -0.09
LCMT2O60294 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.5□□□□□ -0.09
LCMT2O60294 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.5□□□□□ -0.09
LCMT2O60294 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LCMT2O60294 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.5□□□□□ -0.09
LCMT2O60294 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.5□□□□□ -0.09
LCMT2O60294 AC099063.4-201ENST00000641099 1602 ntBASIC14.5□□□□□ -0.09
LCMT2O60294 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LCMT2O60294 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
LCMT2O60294 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.5□□□□□ -0.09
LCMT2O60294 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LCMT2O60294 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LCMT2O60294 FGD5P1-202ENST00000614866 2498 ntBASIC14.5□□□□□ -0.09
LCMT2O60294 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LCMT2O60294 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.5□□□□□ -0.09
LCMT2O60294 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LCMT2O60294 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.49□□□□□ -0.09
LCMT2O60294 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.49□□□□□ -0.09
LCMT2O60294 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.49□□□□□ -0.09
LCMT2O60294 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LCMT2O60294 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.49□□□□□ -0.09
LCMT2O60294 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
LCMT2O60294 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LCMT2O60294 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LCMT2O60294 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.49□□□□□ -0.09
LCMT2O60294 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.49□□□□□ -0.09
LCMT2O60294 AL355864.2-201ENST00000447420 863 ntBASIC14.49□□□□□ -0.09
LCMT2O60294 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.49□□□□□ -0.09
LCMT2O60294 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
LCMT2O60294 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.49□□□□□ -0.09
LCMT2O60294 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.49□□□□□ -0.09
LCMT2O60294 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.49□□□□□ -0.09
LCMT2O60294 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.49□□□□□ -0.09
LCMT2O60294 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.49□□□□□ -0.09
LCMT2O60294 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.49□□□□□ -0.09
LCMT2O60294 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.49□□□□□ -0.09
LCMT2O60294 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
LCMT2O60294 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.49□□□□□ -0.09
LCMT2O60294 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.49□□□□□ -0.09
LCMT2O60294 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCMT2O60294 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
LCMT2O60294 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.48□□□□□ -0.09
LCMT2O60294 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.48□□□□□ -0.09
LCMT2O60294 AC013726.1-201ENST00000563747 2285 ntBASIC14.48□□□□□ -0.09
LCMT2O60294 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LCMT2O60294 CICP23-201ENST00000605013 2741 ntBASIC14.48□□□□□ -0.09
LCMT2O60294 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LCMT2O60294 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCMT2O60294 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms