Protein–RNA interactions for Protein: O43602

DCX, Neuronal migration protein doublecortin, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCXO43602 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.04■□□□□ 0.16
DCXO43602 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.04■□□□□ 0.16
DCXO43602 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.04■□□□□ 0.16
DCXO43602 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
DCXO43602 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.04■□□□□ 0.16
DCXO43602 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.04■□□□□ 0.16
DCXO43602 AC098935.1-201ENST00000446057 611 ntBASIC16.04■□□□□ 0.16
DCXO43602 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.04■□□□□ 0.16
DCXO43602 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.04■□□□□ 0.16
DCXO43602 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.04■□□□□ 0.16
DCXO43602 AC107373.2-201ENST00000607735 490 ntBASIC16.04■□□□□ 0.16
DCXO43602 AC073352.2-201ENST00000609385 439 ntBASIC16.04■□□□□ 0.16
DCXO43602 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.04■□□□□ 0.16
DCXO43602 AC100757.4-201ENST00000626934 759 ntBASIC16.04■□□□□ 0.16
DCXO43602 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
DCXO43602 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
DCXO43602 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.04■□□□□ 0.16
DCXO43602 AC099063.4-201ENST00000641099 1602 ntBASIC16.04■□□□□ 0.16
DCXO43602 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.04■□□□□ 0.16
DCXO43602 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DCXO43602 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
DCXO43602 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.04■□□□□ 0.16
DCXO43602 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
DCXO43602 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.03■□□□□ 0.16
DCXO43602 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
DCXO43602 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.03■□□□□ 0.16
DCXO43602 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
DCXO43602 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.03■□□□□ 0.16
DCXO43602 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.03■□□□□ 0.16
DCXO43602 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.03■□□□□ 0.16
DCXO43602 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.03■□□□□ 0.16
DCXO43602 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
DCXO43602 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.03■□□□□ 0.16
DCXO43602 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
DCXO43602 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.03■□□□□ 0.16
DCXO43602 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.03■□□□□ 0.16
DCXO43602 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.03■□□□□ 0.16
DCXO43602 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
DCXO43602 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DCXO43602 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.02■□□□□ 0.16
DCXO43602 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
DCXO43602 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
DCXO43602 AC005622.1-201ENST00000636801 1703 ntBASIC16.02■□□□□ 0.16
DCXO43602 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
DCXO43602 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
DCXO43602 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DCXO43602 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
DCXO43602 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DCXO43602 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.02■□□□□ 0.16
DCXO43602 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
DCXO43602 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
DCXO43602 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
DCXO43602 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
DCXO43602 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.02■□□□□ 0.16
DCXO43602 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
DCXO43602 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
DCXO43602 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.02■□□□□ 0.16
DCXO43602 AC011742.3-201ENST00000439053 820 ntBASIC16.02■□□□□ 0.16
DCXO43602 KRT18P43-201ENST00000469825 1281 ntBASIC16.02■□□□□ 0.16
DCXO43602 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
DCXO43602 AC022217.1-201ENST00000521069 738 ntBASIC16.02■□□□□ 0.16
DCXO43602 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.02■□□□□ 0.16
DCXO43602 ECM1P1-201ENST00000604092 1279 ntBASIC16.02■□□□□ 0.16
DCXO43602 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.02■□□□□ 0.16
DCXO43602 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
DCXO43602 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms