Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SURF4O15260 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SURF4O15260 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.74□□□□□ -0.21
SURF4O15260 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SURF4O15260 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SURF4O15260 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SURF4O15260 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.74□□□□□ -0.21
SURF4O15260 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.74□□□□□ -0.21
SURF4O15260 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SURF4O15260 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SURF4O15260 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SURF4O15260 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.73□□□□□ -0.21
SURF4O15260 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.73□□□□□ -0.21
SURF4O15260 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
SURF4O15260 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
SURF4O15260 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SURF4O15260 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.73□□□□□ -0.21
SURF4O15260 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.73□□□□□ -0.21
SURF4O15260 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.73□□□□□ -0.21
SURF4O15260 AL512361.1-201ENST00000554200 418 ntBASIC13.73□□□□□ -0.21
SURF4O15260 AC140878.1-201ENST00000565277 250 ntBASIC13.73□□□□□ -0.21
SURF4O15260 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.73□□□□□ -0.21
SURF4O15260 AC000095.1-201ENST00000603208 874 ntBASIC13.73□□□□□ -0.21
SURF4O15260 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.73□□□□□ -0.21
SURF4O15260 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.73□□□□□ -0.21
SURF4O15260 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SURF4O15260 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
SURF4O15260 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.73□□□□□ -0.21
SURF4O15260 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SURF4O15260 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.73□□□□□ -0.21
SURF4O15260 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.73□□□□□ -0.21
SURF4O15260 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SURF4O15260 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.72□□□□□ -0.21
SURF4O15260 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.72□□□□□ -0.21
SURF4O15260 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.72□□□□□ -0.21
SURF4O15260 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SURF4O15260 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.72□□□□□ -0.21
SURF4O15260 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.72□□□□□ -0.21
SURF4O15260 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SURF4O15260 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.72□□□□□ -0.21
SURF4O15260 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.72□□□□□ -0.21
SURF4O15260 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.72□□□□□ -0.21
SURF4O15260 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.72□□□□□ -0.21
SURF4O15260 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.72□□□□□ -0.21
SURF4O15260 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SURF4O15260 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.72□□□□□ -0.21
SURF4O15260 AC069120.2-201ENST00000524091 540 ntBASIC13.72□□□□□ -0.21
SURF4O15260 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.72□□□□□ -0.21
SURF4O15260 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.72□□□□□ -0.21
SURF4O15260 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SURF4O15260 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.72□□□□□ -0.21
SURF4O15260 AL157414.3-201ENST00000624276 1954 ntBASIC13.72□□□□□ -0.21
SURF4O15260 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SURF4O15260 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.72□□□□□ -0.21
SURF4O15260 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.72□□□□□ -0.21
SURF4O15260 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SURF4O15260 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms