Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 RNY3P9-201ENST00000384727 106 ntBASIC16.78■□□□□ 0.28
PITPNM1O00562 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PITPNM1O00562 FXNP2-201ENST00000411625 547 ntBASIC16.78■□□□□ 0.28
PITPNM1O00562 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC16.78■□□□□ 0.28
PITPNM1O00562 AL354877.1-201ENST00000424412 413 ntBASIC16.78■□□□□ 0.28
PITPNM1O00562 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC16.78■□□□□ 0.28
PITPNM1O00562 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC16.78■□□□□ 0.28
PITPNM1O00562 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.78■□□□□ 0.28
PITPNM1O00562 RN7SL720P-201ENST00000488178 304 ntBASIC16.78■□□□□ 0.28
PITPNM1O00562 IMP3P2-201ENST00000489760 475 ntBASIC16.78■□□□□ 0.28
PITPNM1O00562 AC016839.1-201ENST00000578162 867 ntBASIC16.78■□□□□ 0.28
PITPNM1O00562 AC097724.1-201ENST00000609581 426 ntBASIC16.78■□□□□ 0.28
PITPNM1O00562 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.78■□□□□ 0.28
PITPNM1O00562 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.78■□□□□ 0.28
PITPNM1O00562 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.78■□□□□ 0.28
PITPNM1O00562 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PITPNM1O00562 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.78■□□□□ 0.28
PITPNM1O00562 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PITPNM1O00562 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.78■□□□□ 0.28
PITPNM1O00562 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC16.78■□□□□ 0.28
PITPNM1O00562 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PITPNM1O00562 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.78■□□□□ 0.28
PITPNM1O00562 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PITPNM1O00562 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PITPNM1O00562 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
PITPNM1O00562 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PITPNM1O00562 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PITPNM1O00562 AC012313.1-201ENST00000593393 3059 ntBASIC16.78■□□□□ 0.28
PITPNM1O00562 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PITPNM1O00562 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PITPNM1O00562 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PITPNM1O00562 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PITPNM1O00562 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.77■□□□□ 0.28
PITPNM1O00562 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PITPNM1O00562 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.77■□□□□ 0.28
PITPNM1O00562 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.77■□□□□ 0.28
PITPNM1O00562 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PITPNM1O00562 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PITPNM1O00562 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PITPNM1O00562 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PITPNM1O00562 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.77■□□□□ 0.28
PITPNM1O00562 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.77■□□□□ 0.28
PITPNM1O00562 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PITPNM1O00562 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PITPNM1O00562 AL589826.1-201ENST00000340697 249 ntBASIC16.77■□□□□ 0.28
PITPNM1O00562 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
PITPNM1O00562 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PITPNM1O00562 RAP1BP3-201ENST00000407180 549 ntBASIC16.77■□□□□ 0.28
PITPNM1O00562 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.77■□□□□ 0.28
PITPNM1O00562 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PITPNM1O00562 RNU6-648P-201ENST00000410190 107 ntBASIC16.77■□□□□ 0.28
PITPNM1O00562 Y_RNA.604-201ENST00000410574 102 ntBASIC16.77■□□□□ 0.28
PITPNM1O00562 RPL5P28-201ENST00000418634 693 ntBASIC16.77■□□□□ 0.28
PITPNM1O00562 PRELID3BP10-201ENST00000431957 584 ntBASIC16.77■□□□□ 0.28
PITPNM1O00562 AC011290.1-201ENST00000439751 414 ntTSL 5 BASIC16.77■□□□□ 0.28
PITPNM1O00562 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC16.77■□□□□ 0.28
PITPNM1O00562 AL133466.1-201ENST00000447582 150 ntBASIC16.77■□□□□ 0.28
PITPNM1O00562 SPTLC1P5-201ENST00000450718 252 ntBASIC16.77■□□□□ 0.28
PITPNM1O00562 AC018463.1-201ENST00000456674 917 ntBASIC16.77■□□□□ 0.28
PITPNM1O00562 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC16.77■□□□□ 0.28
PITPNM1O00562 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PITPNM1O00562 AC021146.5-201ENST00000503544 545 ntBASIC16.77■□□□□ 0.28
PITPNM1O00562 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.77■□□□□ 0.28
PITPNM1O00562 AC022616.1-201ENST00000518688 554 ntBASIC16.77■□□□□ 0.28
PITPNM1O00562 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC16.77■□□□□ 0.28
PITPNM1O00562 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PITPNM1O00562 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.77■□□□□ 0.28
PITPNM1O00562 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PITPNM1O00562 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC16.77■□□□□ 0.28
PITPNM1O00562 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
PITPNM1O00562 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.77■□□□□ 0.28
PITPNM1O00562 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PITPNM1O00562 AC099518.2-201ENST00000565802 704 ntBASIC16.77■□□□□ 0.28
PITPNM1O00562 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC16.77■□□□□ 0.28
PITPNM1O00562 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.77■□□□□ 0.28
PITPNM1O00562 AC104763.3-201ENST00000613765 618 ntBASIC16.77■□□□□ 0.28
PITPNM1O00562 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.77■□□□□ 0.28
PITPNM1O00562 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PITPNM1O00562 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PITPNM1O00562 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PITPNM1O00562 AC018695.7-201ENST00000624587 2492 ntBASIC16.77■□□□□ 0.27
PITPNM1O00562 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PITPNM1O00562 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PITPNM1O00562 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PITPNM1O00562 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.77■□□□□ 0.27
PITPNM1O00562 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PITPNM1O00562 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PITPNM1O00562 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PITPNM1O00562 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PITPNM1O00562 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PITPNM1O00562 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PITPNM1O00562 AL132656.3-201ENST00000606384 1595 ntBASIC16.77■□□□□ 0.27
PITPNM1O00562 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.76■□□□□ 0.27
PITPNM1O00562 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PITPNM1O00562 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PITPNM1O00562 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PITPNM1O00562 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PITPNM1O00562 AC069224.1-201ENST00000566372 1715 ntBASIC16.76■□□□□ 0.27
PITPNM1O00562 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PITPNM1O00562 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms