Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.38□□□□□ -0.11
UPK1AO00322 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.38□□□□□ -0.11
UPK1AO00322 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UPK1AO00322 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
UPK1AO00322 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.37□□□□□ -0.11
UPK1AO00322 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.37□□□□□ -0.11
UPK1AO00322 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.37□□□□□ -0.11
UPK1AO00322 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.37□□□□□ -0.11
UPK1AO00322 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.37□□□□□ -0.11
UPK1AO00322 TSPY16P-201ENST00000449843 468 ntBASIC14.37□□□□□ -0.11
UPK1AO00322 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.37□□□□□ -0.11
UPK1AO00322 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.37□□□□□ -0.11
UPK1AO00322 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.37□□□□□ -0.11
UPK1AO00322 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.37□□□□□ -0.11
UPK1AO00322 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.37□□□□□ -0.11
UPK1AO00322 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.37□□□□□ -0.11
UPK1AO00322 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.37□□□□□ -0.11
UPK1AO00322 AL049840.4-201ENST00000602422 811 ntBASIC14.37□□□□□ -0.11
UPK1AO00322 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.37□□□□□ -0.11
UPK1AO00322 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.37□□□□□ -0.11
UPK1AO00322 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.37□□□□□ -0.11
UPK1AO00322 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.37□□□□□ -0.11
UPK1AO00322 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.37□□□□□ -0.11
UPK1AO00322 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 AC067930.6-201ENST00000623257 4947 ntBASIC14.37□□□□□ -0.11
UPK1AO00322 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
UPK1AO00322 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
UPK1AO00322 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.37□□□□□ -0.11
UPK1AO00322 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UPK1AO00322 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1AO00322 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1AO00322 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1AO00322 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.36□□□□□ -0.11
UPK1AO00322 SLC7A15P-201ENST00000424028 1363 ntBASIC14.36□□□□□ -0.11
UPK1AO00322 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1AO00322 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1AO00322 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1AO00322 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
UPK1AO00322 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK1AO00322 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1AO00322 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1AO00322 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1AO00322 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1AO00322 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
UPK1AO00322 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK1AO00322 AC026410.3-201ENST00000514280 936 ntBASIC14.36□□□□□ -0.11
UPK1AO00322 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.36□□□□□ -0.11
UPK1AO00322 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK1AO00322 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.36□□□□□ -0.11
UPK1AO00322 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
UPK1AO00322 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1AO00322 AC099568.2-201ENST00000609194 695 ntBASIC14.36□□□□□ -0.11
UPK1AO00322 MIR8072-201ENST00000614241 80 ntBASIC14.36□□□□□ -0.11
UPK1AO00322 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK1AO00322 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
UPK1AO00322 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.36□□□□□ -0.11
UPK1AO00322 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
UPK1AO00322 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
UPK1AO00322 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.36□□□□□ -0.11
UPK1AO00322 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.36□□□□□ -0.11
UPK1AO00322 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1AO00322 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.36□□□□□ -0.11
UPK1AO00322 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
UPK1AO00322 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
UPK1AO00322 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1AO00322 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UPK1AO00322 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
UPK1AO00322 NFIC-211ENST00000641145 8399 ntBASIC14.35□□□□□ -0.11
UPK1AO00322 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UPK1AO00322 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.35□□□□□ -0.11
UPK1AO00322 AC011474.4-201ENST00000623523 2076 ntBASIC14.35□□□□□ -0.11
UPK1AO00322 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UPK1AO00322 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK1AO00322 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK1AO00322 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms