Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PRAMEF25A6NGN4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 AC098614.1-201ENST00000368528 745 ntBASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 AP005018.1-201ENST00000525475 301 ntBASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 AC120045.2-201ENST00000567334 178 ntBASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PRAMEF25A6NGN4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PRAMEF25A6NGN4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PRAMEF25A6NGN4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
PRAMEF25A6NGN4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PRAMEF25A6NGN4 HSPA7-201ENST00000445535 1927 ntBASIC14.21□□□□□ -0.14
PRAMEF25A6NGN4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PRAMEF25A6NGN4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.21□□□□□ -0.14
PRAMEF25A6NGN4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PRAMEF25A6NGN4 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PRAMEF25A6NGN4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PRAMEF25A6NGN4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PRAMEF25A6NGN4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.14
PRAMEF25A6NGN4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PRAMEF25A6NGN4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.2□□□□□ -0.14
PRAMEF25A6NGN4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms