Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SHISA3A0PJX4 AC015909.5-201ENST00000624336 2266 ntBASIC13.22□□□□□ -0.29
SHISA3A0PJX4 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 AC111170.3-201ENST00000624282 2464 ntBASIC13.21□□□□□ -0.29
SHISA3A0PJX4 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHISA3A0PJX4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SHISA3A0PJX4 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.21□□□□□ -0.3
SHISA3A0PJX4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SHISA3A0PJX4 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SHISA3A0PJX4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.21□□□□□ -0.3
SHISA3A0PJX4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SHISA3A0PJX4 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SHISA3A0PJX4 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
SHISA3A0PJX4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.21□□□□□ -0.3
SHISA3A0PJX4 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SHISA3A0PJX4 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SHISA3A0PJX4 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SHISA3A0PJX4 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 AC004241.5-201ENST00000623870 2448 ntBASIC13.2□□□□□ -0.3
SHISA3A0PJX4 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SHISA3A0PJX4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms