Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.95■□□□□ 0.62
LOC102724428A0A0B4J2F2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.95■□□□□ 0.62
LOC102724428A0A0B4J2F2 TMBIM7P-202ENST00000641474 1516 ntBASIC18.95■□□□□ 0.62
LOC102724428A0A0B4J2F2 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 AL807761.2-201ENST00000422849 729 ntBASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 TSPY25P-201ENST00000429463 745 ntBASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 AC025262.2-201ENST00000623975 1056 ntBASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 AC127024.7-201ENST00000625101 200 ntBASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 FAS-202ENST00000352159 1722 ntTSL 5 BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LOC102724428A0A0B4J2F2 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 AL513523.2-202ENST00000427283 2040 ntBASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 AC018463.1-201ENST00000456674 917 ntBASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 AC009560.1-201ENST00000620208 434 ntBASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 REXO1L2P-201ENST00000425429 2069 ntBASIC18.93■□□□□ 0.62
LOC102724428A0A0B4J2F2 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 KRT8P31-201ENST00000504812 1408 ntBASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 RNA5SP359-201ENST00000364838 113 ntBASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 TMCO5B-205ENST00000530020 894 ntBASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 AC084781.1-201ENST00000613737 656 ntBASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LOC102724428A0A0B4J2F2 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms