Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC22.18■■□□□ 1.14
CDC42BPBQ9Y5S2 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC22.18■■□□□ 1.14
CDC42BPBQ9Y5S2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC22.18■■□□□ 1.14
CDC42BPBQ9Y5S2 AL136172.1-201ENST00000598590 1394 ntBASIC22.18■■□□□ 1.14
CDC42BPBQ9Y5S2 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPBQ9Y5S2 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC22.18■■□□□ 1.14
CDC42BPBQ9Y5S2 PCDHA1-201ENST00000378133 2726 ntBASIC22.18■■□□□ 1.14
CDC42BPBQ9Y5S2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPBQ9Y5S2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42BPBQ9Y5S2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC22.18■■□□□ 1.14
CDC42BPBQ9Y5S2 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC22.18■■□□□ 1.14
CDC42BPBQ9Y5S2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 AC002044.2-201ENST00000624910 970 ntBASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 DBP-202ENST00000593500 712 ntTSL 2 BASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42BPBQ9Y5S2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 RGS5-216ENST00000449680 788 ntTSL 3 BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 NSD1-211ENST00000511258 809 ntTSL 3 BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 NAA40-205ENST00000539656 577 ntTSL 4 BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 API5-208ENST00000531273 1868 ntTSL 2 BASIC22.16■■□□□ 1.14
CDC42BPBQ9Y5S2 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 CICP23-201ENST00000605013 2741 ntBASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 ALG1L13P-202ENST00000519320 584 ntBASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 RN7SL470P-201ENST00000583069 259 ntBASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 AC006158.1-201ENST00000610661 249 ntBASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 PRAL-201ENST00000624952 3286 ntBASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC22.15■■□□□ 1.14
CDC42BPBQ9Y5S2 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CDC42BPBQ9Y5S2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDC42BPBQ9Y5S2 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDC42BPBQ9Y5S2 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDC42BPBQ9Y5S2 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC22.14■■□□□ 1.14
CDC42BPBQ9Y5S2 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC22.14■■□□□ 1.14
CDC42BPBQ9Y5S2 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDC42BPBQ9Y5S2 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC22.14■■□□□ 1.14
CDC42BPBQ9Y5S2 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC22.14■■□□□ 1.14
CDC42BPBQ9Y5S2 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC22.14■■□□□ 1.14
CDC42BPBQ9Y5S2 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC22.14■■□□□ 1.14
CDC42BPBQ9Y5S2 AC244250.3-201ENST00000620749 366 ntBASIC22.14■■□□□ 1.14
CDC42BPBQ9Y5S2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CDC42BPBQ9Y5S2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.14
CDC42BPBQ9Y5S2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms