Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 RPL18AP16-201ENST00000424057 531 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 KRT18P62-201ENST00000446618 1287 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AC005777.1-201ENST00000588332 187 ntBASIC5.94□□□□□ -1.46
MACF1Q9UPN3 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 AC020909.3-201ENST00000598194 375 ntTSL 3 BASIC5.94□□□□□ -1.46
MACF1Q9UPN3 LINC01101-201ENST00000622953 1884 ntBASIC5.93□□□□□ -1.46
MACF1Q9UPN3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 LINP1-201ENST00000417112 917 ntTSL 2 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 DNM1P50-201ENST00000565767 508 ntBASIC5.93□□□□□ -1.46
MACF1Q9UPN3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 MIR4689-201ENST00000582517 70 ntBASIC5.93□□□□□ -1.46
MACF1Q9UPN3 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 AL391903.1-201ENST00000407513 365 ntBASIC5.93□□□□□ -1.46
MACF1Q9UPN3 RPSAP16-201ENST00000447583 821 ntBASIC5.93□□□□□ -1.46
MACF1Q9UPN3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC5.93□□□□□ -1.46
MACF1Q9UPN3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 CASC15-202ENST00000561912 1449 ntTSL 5 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 RAB13-201ENST00000368575 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 HNRNPA1P34-201ENST00000391992 950 ntBASIC5.93□□□□□ -1.46
MACF1Q9UPN3 SWI5-204ENST00000419867 1048 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 AL355075.5-201ENST00000553568 890 ntBASIC5.93□□□□□ -1.46
MACF1Q9UPN3 RN7SL665P-201ENST00000578793 300 ntBASIC5.93□□□□□ -1.46
MACF1Q9UPN3 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 RN7SKP230-201ENST00000365642 335 ntBASIC5.93□□□□□ -1.46
MACF1Q9UPN3 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 AC012066.1-201ENST00000439252 694 ntBASIC5.93□□□□□ -1.46
MACF1Q9UPN3 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 GOLGA2P8-201ENST00000505201 779 ntBASIC5.93□□□□□ -1.46
MACF1Q9UPN3 HNRNPA1P56-201ENST00000505767 954 ntBASIC5.93□□□□□ -1.46
MACF1Q9UPN3 RNA5SP288-201ENST00000516075 93 ntBASIC5.93□□□□□ -1.46
MACF1Q9UPN3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 AC021439.1-201ENST00000562975 591 ntTSL 4 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 AC009166.1-201ENST00000570060 487 ntTSL 2 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 AC063977.2-201ENST00000601996 421 ntBASIC5.93□□□□□ -1.46
MACF1Q9UPN3 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 AL807752.1-201ENST00000395082 1322 ntBASIC5.93□□□□□ -1.46
MACF1Q9UPN3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
MACF1Q9UPN3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms