Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 AC026954.1-201ENST00000429771 1293 ntBASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 KRT18P25-201ENST00000508931 1278 ntBASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 RHOXF1P1-202ENST00000635473 501 ntBASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA1Q9UND3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 AC112693.3-201ENST00000624819 1983 ntBASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 AC006486.2-201ENST00000624246 2199 ntBASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 KRT90P-201ENST00000549264 1064 ntBASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA1Q9UND3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA1Q9UND3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA1Q9UND3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA1Q9UND3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NPIPA1Q9UND3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NPIPA1Q9UND3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA1Q9UND3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.02□□□□□ -0.16
NPIPA1Q9UND3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA1Q9UND3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms