Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 BANF1P1-201ENST00000553684 263 ntBASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 MIR6080-201ENST00000617359 66 ntBASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 REXO1L2P-201ENST00000425429 2069 ntBASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB4Q9UN71 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 AC084364.1-201ENST00000551967 1556 ntBASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 AC093520.2-201ENST00000561830 333 ntBASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB4Q9UN71 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 AC027612.1-201ENST00000445234 2395 ntBASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 WASH3P-207ENST00000560956 1394 ntBASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 FO538757.1-201ENST00000623083 1397 ntBASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDHGB4Q9UN71 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms