Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL662799.1-202ENST00000614205 422 ntBASIC18.15■□□□□ 0.5
UPF3BQ9BZI7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.15■□□□□ 0.5
UPF3BQ9BZI7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.15■□□□□ 0.5
UPF3BQ9BZI7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
UPF3BQ9BZI7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF3BQ9BZI7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UPF3BQ9BZI7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF3BQ9BZI7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF3BQ9BZI7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.15■□□□□ 0.5
UPF3BQ9BZI7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UPF3BQ9BZI7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC18.15■□□□□ 0.5
UPF3BQ9BZI7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF3BQ9BZI7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UPF3BQ9BZI7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
UPF3BQ9BZI7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
UPF3BQ9BZI7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF3BQ9BZI7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UPF3BQ9BZI7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
UPF3BQ9BZI7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
UPF3BQ9BZI7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
UPF3BQ9BZI7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
UPF3BQ9BZI7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
UPF3BQ9BZI7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
UPF3BQ9BZI7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 MYO15B-237ENST00000642007 4893 ntBASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 AC004066.1-201ENST00000502488 802 ntBASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 RARRES2P5-201ENST00000564013 466 ntBASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UPF3BQ9BZI7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 AL158070.2-201ENST00000623713 1621 ntBASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 SPDYE19P-201ENST00000338590 713 ntBASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 HLA-K-203ENST00000430151 1046 ntBASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 AL512638.1-201ENST00000457493 794 ntBASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 VDAC1P7-201ENST00000462417 847 ntBASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 DOC2GP-202ENST00000514950 1163 ntBASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 TPRX2P-201ENST00000535362 881 ntBASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 AC036164.1-201ENST00000570544 333 ntBASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 AL049840.4-201ENST00000602422 811 ntBASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 AL137783.1-201ENST00000623494 1896 ntBASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UPF3BQ9BZI7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UPF3BQ9BZI7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
UPF3BQ9BZI7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
UPF3BQ9BZI7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPF3BQ9BZI7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms