Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 AL031713.1-201ENST00000564813 661 ntBASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 PHBP15-201ENST00000574228 665 ntBASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 CAP2P1-201ENST00000557743 1390 ntBASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 AC008894.3-201ENST00000624324 3103 ntBASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RTFDC1Q9BY42 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 RPL7P35-201ENST00000446943 740 ntBASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 AC008723.1-201ENST00000506922 207 ntBASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 NAT9-220ENST00000582870 896 ntTSL 5 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 MIR6769A-201ENST00000617340 73 ntBASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 LILRP1-201ENST00000444199 1370 ntBASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTFDC1Q9BY42 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 RPS9P1-201ENST00000419943 583 ntBASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 RN7SL818P-201ENST00000485099 259 ntBASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 AP002803.1-201ENST00000528836 498 ntBASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 MIR4649-201ENST00000582839 64 ntBASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 RN7SL725P-201ENST00000606439 259 ntBASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.12■□□□□ 0.49
RTFDC1Q9BY42 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms