Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AC140878.1-201ENST00000565277 250 ntBASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 KRT8P44-201ENST00000441609 1350 ntBASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CHRDL1Q9BU40 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.15□□□□□ -0.47
CHRDL1Q9BU40 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
CHRDL1Q9BU40 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.15□□□□□ -0.47
CHRDL1Q9BU40 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 FP325330.2-201ENST00000624219 5630 ntBASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 KRT18P28-201ENST00000453838 1332 ntBASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 KRT18P64-201ENST00000434946 1219 ntBASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 METTL21AP1-201ENST00000438852 635 ntBASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 FAM86GP-201ENST00000448322 971 ntBASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 RN7SL618P-201ENST00000477850 296 ntBASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 AC015911.4-201ENST00000588022 1070 ntBASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 Z97205.2-201ENST00000564697 1639 ntBASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 AC107918.4-201ENST00000641966 3141 ntBASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CHRDL1Q9BU40 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 BEND3P1-201ENST00000421591 1944 ntBASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CHRDL1Q9BU40 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms