Protein–RNA interactions for Protein: Q99956

DUSP9, Dual specificity protein phosphatase 9, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP9Q99956 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.61■□□□□ 0.25
DUSP9Q99956 AL132655.2-201ENST00000596276 594 ntBASIC16.61■□□□□ 0.25
DUSP9Q99956 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
DUSP9Q99956 AC093726.1-201ENST00000608064 963 ntBASIC16.61■□□□□ 0.25
DUSP9Q99956 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.61■□□□□ 0.25
DUSP9Q99956 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.61■□□□□ 0.25
DUSP9Q99956 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.61■□□□□ 0.25
DUSP9Q99956 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DUSP9Q99956 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DUSP9Q99956 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DUSP9Q99956 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DUSP9Q99956 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
DUSP9Q99956 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.61■□□□□ 0.25
DUSP9Q99956 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DUSP9Q99956 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.61■□□□□ 0.25
DUSP9Q99956 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DUSP9Q99956 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.61■□□□□ 0.25
DUSP9Q99956 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DUSP9Q99956 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DUSP9Q99956 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.61■□□□□ 0.25
DUSP9Q99956 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.61■□□□□ 0.25
DUSP9Q99956 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DUSP9Q99956 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DUSP9Q99956 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DUSP9Q99956 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUSP9Q99956 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DUSP9Q99956 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUSP9Q99956 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
DUSP9Q99956 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUSP9Q99956 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DUSP9Q99956 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUSP9Q99956 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUSP9Q99956 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUSP9Q99956 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUSP9Q99956 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.6■□□□□ 0.25
DUSP9Q99956 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.6■□□□□ 0.25
DUSP9Q99956 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.6■□□□□ 0.25
DUSP9Q99956 AP001582.1-201ENST00000525856 295 ntBASIC16.6■□□□□ 0.25
DUSP9Q99956 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.6■□□□□ 0.25
DUSP9Q99956 AC123567.1-201ENST00000548294 1261 ntBASIC16.6■□□□□ 0.25
DUSP9Q99956 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.6■□□□□ 0.25
DUSP9Q99956 AC140912.1-201ENST00000577171 1054 ntBASIC16.6■□□□□ 0.25
DUSP9Q99956 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.6■□□□□ 0.25
DUSP9Q99956 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
DUSP9Q99956 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.6■□□□□ 0.25
DUSP9Q99956 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.6■□□□□ 0.25
DUSP9Q99956 AL035252.4-201ENST00000624174 288 ntBASIC16.6■□□□□ 0.25
DUSP9Q99956 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
DUSP9Q99956 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DUSP9Q99956 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUSP9Q99956 AC015656.1-201ENST00000624209 3578 ntBASIC16.6■□□□□ 0.25
DUSP9Q99956 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
DUSP9Q99956 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.6■□□□□ 0.25
DUSP9Q99956 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUSP9Q99956 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.6■□□□□ 0.25
DUSP9Q99956 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
DUSP9Q99956 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
DUSP9Q99956 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUSP9Q99956 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUSP9Q99956 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
DUSP9Q99956 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUSP9Q99956 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DUSP9Q99956 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.59■□□□□ 0.25
DUSP9Q99956 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUSP9Q99956 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUSP9Q99956 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
DUSP9Q99956 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUSP9Q99956 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
DUSP9Q99956 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUSP9Q99956 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.59■□□□□ 0.25
DUSP9Q99956 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DUSP9Q99956 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
DUSP9Q99956 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.59■□□□□ 0.25
DUSP9Q99956 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
DUSP9Q99956 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
DUSP9Q99956 COX5BP8-201ENST00000416911 349 ntBASIC16.59■□□□□ 0.25
DUSP9Q99956 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.59■□□□□ 0.25
DUSP9Q99956 EIF3FP3-201ENST00000434851 1086 ntBASIC16.59■□□□□ 0.25
DUSP9Q99956 TPT1P11-201ENST00000458482 498 ntBASIC16.59■□□□□ 0.25
DUSP9Q99956 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.59■□□□□ 0.25
DUSP9Q99956 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
DUSP9Q99956 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.59■□□□□ 0.25
DUSP9Q99956 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
DUSP9Q99956 LINC01230-201ENST00000625222 3017 ntBASIC16.59■□□□□ 0.25
DUSP9Q99956 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
DUSP9Q99956 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.59■□□□□ 0.25
DUSP9Q99956 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DUSP9Q99956 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUSP9Q99956 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.59■□□□□ 0.25
DUSP9Q99956 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUSP9Q99956 CU639417.3-201ENST00000624240 1404 ntBASIC16.59■□□□□ 0.25
DUSP9Q99956 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
DUSP9Q99956 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DUSP9Q99956 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DUSP9Q99956 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DUSP9Q99956 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUSP9Q99956 GRK6P1-201ENST00000400595 1711 ntBASIC16.59■□□□□ 0.25
DUSP9Q99956 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUSP9Q99956 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
DUSP9Q99956 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms