Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
TRGV9Q99603 AC087499.5-201ENST00000452760 1342 ntBASIC11.86□□□□□ -0.51
TRGV9Q99603 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
TRGV9Q99603 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
TRGV9Q99603 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
TRGV9Q99603 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
TRGV9Q99603 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
TRGV9Q99603 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 AC006504.5-208ENST00000588784 2401 ntBASIC11.85□□□□□ -0.51
TRGV9Q99603 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 RERG-209ENST00000546331 1383 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV9Q99603 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 AL645937.2-201ENST00000396808 931 ntBASIC11.85□□□□□ -0.51
TRGV9Q99603 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
TRGV9Q99603 AP006288.1-201ENST00000446065 395 ntBASIC11.85□□□□□ -0.51
TRGV9Q99603 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.85□□□□□ -0.51
TRGV9Q99603 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.85□□□□□ -0.51
TRGV9Q99603 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV9Q99603 HLA-J-203ENST00000494367 1087 ntBASIC11.85□□□□□ -0.51
TRGV9Q99603 GAPDHP40-201ENST00000505218 1006 ntBASIC11.85□□□□□ -0.51
TRGV9Q99603 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.85□□□□□ -0.51
TRGV9Q99603 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV9Q99603 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TRGV9Q99603 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV9Q99603 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.85□□□□□ -0.51
TRGV9Q99603 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV9Q99603 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV9Q99603 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.85□□□□□ -0.51
TRGV9Q99603 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV9Q99603 AC092337.1-201ENST00000568699 1129 ntBASIC11.85□□□□□ -0.51
TRGV9Q99603 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.85□□□□□ -0.51
TRGV9Q99603 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC11.85□□□□□ -0.51
TRGV9Q99603 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.85□□□□□ -0.51
TRGV9Q99603 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
TRGV9Q99603 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV9Q99603 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.85□□□□□ -0.51
TRGV9Q99603 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
TRGV9Q99603 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV9Q99603 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV9Q99603 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
TRGV9Q99603 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV9Q99603 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV9Q99603 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TRGV9Q99603 TUBB3P1-201ENST00000405796 1332 ntBASIC11.85□□□□□ -0.51
TRGV9Q99603 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV9Q99603 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
TRGV9Q99603 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.84□□□□□ -0.51
TRGV9Q99603 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.84□□□□□ -0.51
TRGV9Q99603 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
TRGV9Q99603 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TRGV9Q99603 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
TRGV9Q99603 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.84□□□□□ -0.51
TRGV9Q99603 BEND3P1-201ENST00000421591 1944 ntBASIC11.84□□□□□ -0.51
TRGV9Q99603 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
TRGV9Q99603 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.84□□□□□ -0.51
TRGV9Q99603 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TRGV9Q99603 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TRGV9Q99603 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
TRGV9Q99603 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV9Q99603 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC11.84□□□□□ -0.51
TRGV9Q99603 AC125807.1-201ENST00000483097 614 ntBASIC11.84□□□□□ -0.51
TRGV9Q99603 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
TRGV9Q99603 AC022447.6-201ENST00000515522 438 ntBASIC11.84□□□□□ -0.51
TRGV9Q99603 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.84□□□□□ -0.51
TRGV9Q99603 AC069120.2-201ENST00000524091 540 ntBASIC11.84□□□□□ -0.51
TRGV9Q99603 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.84□□□□□ -0.51
TRGV9Q99603 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.84□□□□□ -0.51
TRGV9Q99603 AC044860.1-202ENST00000559481 777 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms