Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 AC074338.1-201ENST00000416825 156 ntBASIC13.92□□□□□ -0.18
SNX18Q96RF0 BASP1P1-201ENST00000430708 665 ntBASIC13.92□□□□□ -0.18
SNX18Q96RF0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 AC051619.7-201ENST00000568314 623 ntBASIC13.92□□□□□ -0.18
SNX18Q96RF0 MIR4453-201ENST00000584019 89 ntBASIC13.92□□□□□ -0.18
SNX18Q96RF0 AC025048.3-201ENST00000590609 569 ntBASIC13.92□□□□□ -0.18
SNX18Q96RF0 AL589739.1-201ENST00000607720 493 ntBASIC13.92□□□□□ -0.18
SNX18Q96RF0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 AC005702.4-201ENST00000618393 416 ntBASIC13.92□□□□□ -0.18
SNX18Q96RF0 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SNX18Q96RF0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
SNX18Q96RF0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 AL035633.1-201ENST00000406139 838 ntBASIC13.91□□□□□ -0.18
SNX18Q96RF0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 AC055876.3-201ENST00000431496 288 ntBASIC13.91□□□□□ -0.18
SNX18Q96RF0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 AC138649.4-201ENST00000612222 287 ntBASIC13.91□□□□□ -0.18
SNX18Q96RF0 AL033527.5-202ENST00000641632 1098 ntBASIC13.91□□□□□ -0.18
SNX18Q96RF0 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SNX18Q96RF0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SNX18Q96RF0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms