Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 KRT8P29-201ENST00000420409 1371 ntBASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 SPTLC1P5-201ENST00000450718 252 ntBASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 AP001505.2-201ENST00000616815 443 ntBASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNGAP1Q96PV0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
SYNGAP1Q96PV0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
SYNGAP1Q96PV0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SYNGAP1Q96PV0 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 AP000593.2-201ENST00000542775 1433 ntBASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 TUBBP5-203ENST00000508529 1334 ntBASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 AC005740.2-201ENST00000511085 419 ntBASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 AC022217.1-201ENST00000521069 738 ntBASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 MIR4722-201ENST00000578292 60 ntBASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 AC004466.1-201ENST00000599515 1080 ntBASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 AL645939.5-201ENST00000606834 243 ntBASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 CU633904.3-201ENST00000624042 1029 ntBASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.14■□□□□ 0.33
SYNGAP1Q96PV0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNGAP1Q96PV0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms