Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.31■□□□□ 0.2
SNX27Q96L92 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SNX27Q96L92 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX27Q96L92 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
SNX27Q96L92 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.3■□□□□ 0.2
SNX27Q96L92 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.3■□□□□ 0.2
SNX27Q96L92 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 PPOX-204ENST00000462866 473 ntTSL 5 BASIC16.3■□□□□ 0.2
SNX27Q96L92 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 PPY2P-201ENST00000582808 702 ntBASIC16.3■□□□□ 0.2
SNX27Q96L92 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.3■□□□□ 0.2
SNX27Q96L92 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.3■□□□□ 0.2
SNX27Q96L92 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX27Q96L92 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
SNX27Q96L92 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.3■□□□□ 0.2
SNX27Q96L92 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
SNX27Q96L92 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX27Q96L92 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
SNX27Q96L92 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.29■□□□□ 0.2
SNX27Q96L92 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX27Q96L92 FKBP4P6-201ENST00000457486 1332 ntBASIC16.29■□□□□ 0.2
SNX27Q96L92 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SNX27Q96L92 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 AL023775.1-201ENST00000454907 1746 ntBASIC16.29■□□□□ 0.2
SNX27Q96L92 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.29■□□□□ 0.2
SNX27Q96L92 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 MIR326-201ENST00000362220 95 ntBASIC16.29■□□□□ 0.2
SNX27Q96L92 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SNX27Q96L92 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.29■□□□□ 0.2
SNX27Q96L92 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SNX27Q96L92 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.29■□□□□ 0.2
SNX27Q96L92 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SNX27Q96L92 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.29■□□□□ 0.2
SNX27Q96L92 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.29■□□□□ 0.2
SNX27Q96L92 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.29■□□□□ 0.2
SNX27Q96L92 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.29■□□□□ 0.2
SNX27Q96L92 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX27Q96L92 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.29■□□□□ 0.2
SNX27Q96L92 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.29■□□□□ 0.2
SNX27Q96L92 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
SNX27Q96L92 AC138696.2-201ENST00000607376 223 ntBASIC16.29■□□□□ 0.2
SNX27Q96L92 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.29■□□□□ 0.2
SNX27Q96L92 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.29■□□□□ 0.2
SNX27Q96L92 ZACNP1-201ENST00000612259 710 ntBASIC16.29■□□□□ 0.2
SNX27Q96L92 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.29■□□□□ 0.2
SNX27Q96L92 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SNX27Q96L92 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX27Q96L92 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX27Q96L92 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.29■□□□□ 0.2
SNX27Q96L92 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX27Q96L92 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX27Q96L92 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SNX27Q96L92 AP000593.2-201ENST00000542775 1433 ntBASIC16.28■□□□□ 0.2
SNX27Q96L92 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms