Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IFT43Q96FT9 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
IFT43Q96FT9 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT43Q96FT9 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT43Q96FT9 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IFT43Q96FT9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT43Q96FT9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT43Q96FT9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT43Q96FT9 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT43Q96FT9 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT43Q96FT9 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT43Q96FT9 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT43Q96FT9 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT43Q96FT9 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 IGHV3-71-201ENST00000523324 359 ntBASIC15.71■□□□□ 0.11
IFT43Q96FT9 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 AC025181.2-201ENST00000606994 802 ntBASIC15.71■□□□□ 0.11
IFT43Q96FT9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT43Q96FT9 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT43Q96FT9 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IFT43Q96FT9 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 KRT8P44-201ENST00000441609 1350 ntBASIC15.71■□□□□ 0.11
IFT43Q96FT9 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
IFT43Q96FT9 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IFT43Q96FT9 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
IFT43Q96FT9 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
IFT43Q96FT9 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
IFT43Q96FT9 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 RN7SL837P-201ENST00000463010 287 ntBASIC15.7■□□□□ 0.1
IFT43Q96FT9 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 CTBP2P3-201ENST00000585629 1255 ntBASIC15.7■□□□□ 0.1
IFT43Q96FT9 AC000095.1-201ENST00000603208 874 ntBASIC15.7■□□□□ 0.1
IFT43Q96FT9 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 AC244517.3-201ENST00000616254 1235 ntBASIC15.7■□□□□ 0.1
IFT43Q96FT9 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 AC015656.1-201ENST00000624209 3578 ntBASIC15.7■□□□□ 0.1
IFT43Q96FT9 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 OR2I1P-210ENST00000642037 4691 ntBASIC15.7■□□□□ 0.1
IFT43Q96FT9 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IFT43Q96FT9 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms