Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 AL359258.3-201ENST00000622910 2331 ntBASIC14.39□□□□□ -0.11
TM9SF4Q92544 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF4Q92544 AC005089.1-201ENST00000619486 2241 ntBASIC14.39□□□□□ -0.11
TM9SF4Q92544 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF4Q92544 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF4Q92544 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TM9SF4Q92544 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
TM9SF4Q92544 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 AL121723.1-201ENST00000445194 1519 ntBASIC14.38□□□□□ -0.11
TM9SF4Q92544 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 AC092933.1-201ENST00000393644 945 ntBASIC14.38□□□□□ -0.11
TM9SF4Q92544 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 KRT18P64-201ENST00000434946 1219 ntBASIC14.38□□□□□ -0.11
TM9SF4Q92544 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 RHOXF1P1-202ENST00000635473 501 ntBASIC14.38□□□□□ -0.11
TM9SF4Q92544 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TM9SF4Q92544 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TM9SF4Q92544 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 FTH1P14-201ENST00000482930 551 ntBASIC14.37□□□□□ -0.11
TM9SF4Q92544 KRT18P25-201ENST00000508931 1278 ntBASIC14.37□□□□□ -0.11
TM9SF4Q92544 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 AC023310.1-201ENST00000554836 735 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 274.1 ms