Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.02□□□□□ -0.17
CT55Q8WUE5 AC090164.2-201ENST00000611487 516 ntBASIC14.02□□□□□ -0.17
CT55Q8WUE5 AL136295.7-201ENST00000619226 1200 ntBASIC14.02□□□□□ -0.17
CT55Q8WUE5 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CT55Q8WUE5 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CT55Q8WUE5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CT55Q8WUE5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CT55Q8WUE5 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CT55Q8WUE5 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.02□□□□□ -0.17
CT55Q8WUE5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CT55Q8WUE5 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.02□□□□□ -0.17
CT55Q8WUE5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 NUP210P1-202ENST00000504322 710 ntBASIC14.01□□□□□ -0.17
CT55Q8WUE5 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 RN7SL574P-201ENST00000581512 297 ntBASIC14.01□□□□□ -0.17
CT55Q8WUE5 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.01□□□□□ -0.17
CT55Q8WUE5 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CT55Q8WUE5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CT55Q8WUE5 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CT55Q8WUE5 API5-202ENST00000420461 2009 ntTSL 2 BASIC14□□□□□ -0.17
CT55Q8WUE5 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14□□□□□ -0.17
CT55Q8WUE5 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CT55Q8WUE5 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CT55Q8WUE5 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CT55Q8WUE5 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CT55Q8WUE5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14□□□□□ -0.17
CT55Q8WUE5 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CT55Q8WUE5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CT55Q8WUE5 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CT55Q8WUE5 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14□□□□□ -0.17
CT55Q8WUE5 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14□□□□□ -0.17
CT55Q8WUE5 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14□□□□□ -0.17
CT55Q8WUE5 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CT55Q8WUE5 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14□□□□□ -0.17
CT55Q8WUE5 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14□□□□□ -0.17
CT55Q8WUE5 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14□□□□□ -0.17
CT55Q8WUE5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14□□□□□ -0.17
CT55Q8WUE5 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14□□□□□ -0.17
CT55Q8WUE5 HLA-DQB2-229ENST00000411527 1059 ntBASIC14□□□□□ -0.17
CT55Q8WUE5 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14□□□□□ -0.17
CT55Q8WUE5 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14□□□□□ -0.17
CT55Q8WUE5 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CT55Q8WUE5 AC012618.1-201ENST00000461223 412 ntBASIC14□□□□□ -0.17
CT55Q8WUE5 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14□□□□□ -0.17
CT55Q8WUE5 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14□□□□□ -0.17
CT55Q8WUE5 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14□□□□□ -0.17
CT55Q8WUE5 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14□□□□□ -0.17
CT55Q8WUE5 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14□□□□□ -0.17
CT55Q8WUE5 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14□□□□□ -0.17
CT55Q8WUE5 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14□□□□□ -0.17
CT55Q8WUE5 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14□□□□□ -0.17
CT55Q8WUE5 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14□□□□□ -0.17
CT55Q8WUE5 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CT55Q8WUE5 AC132192.2-201ENST00000596206 1147 ntBASIC14□□□□□ -0.17
CT55Q8WUE5 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14□□□□□ -0.17
CT55Q8WUE5 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14□□□□□ -0.17
CT55Q8WUE5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms