Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 AC092552.1-201ENST00000547243 906 ntBASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SIMC1Q8NDZ2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 CICP20-201ENST00000443330 2801 ntBASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 AJ011931.1-201ENST00000618749 2492 ntBASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 DGCR5-201ENST00000399539 862 ntBASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 AC104457.1-201ENST00000401024 814 ntBASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 AC027307.3-201ENST00000594262 1100 ntBASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 CR383656.2-201ENST00000548656 2254 ntBASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SIMC1Q8NDZ2 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 INTS4P2-202ENST00000614726 2019 ntBASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 AL138799.1-201ENST00000448213 1675 ntBASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 CRB3P1-201ENST00000449338 276 ntBASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.34□□□□□ -0.11
SIMC1Q8NDZ2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms