Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 BAK1P1-201ENST00000317045 636 ntBASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC168Q8NDH2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 AC004522.1-201ENST00000419978 654 ntBASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 HLA-K-203ENST00000430151 1046 ntBASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 DUTP3-201ENST00000450025 415 ntBASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 FTH1P22-201ENST00000456305 520 ntBASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 SIGLEC18P-201ENST00000602271 909 ntBASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CCDC168Q8NDH2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 DUX4L47-201ENST00000566374 394 ntBASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 AC087392.5-201ENST00000612517 489 ntBASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC168Q8NDH2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC168Q8NDH2 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms