Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 GPAA1P2-201ENST00000417923 928 ntBASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 AC025279.2-201ENST00000569730 653 ntBASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 AC015910.1-201ENST00000579400 975 ntBASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 GNRHR2-203ENST00000581100 1187 ntBASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC155Q8N6L0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 MIR3615-201ENST00000581999 87 ntBASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 AP005019.2-201ENST00000615104 511 ntBASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC155Q8N6L0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 AC006033.1-201ENST00000440505 426 ntBASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 KRT8P13-201ENST00000463294 1010 ntBASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.21■□□□□ 0.35
CCDC155Q8N6L0 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms