Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 AC104457.1-201ENST00000401024 814 ntBASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 FAM58CP-201ENST00000435741 640 ntBASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 MKNK2P1-201ENST00000437526 628 ntBASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM42Q8IWZ5 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 AC211486.1-202ENST00000416371 468 ntBASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 AC211476.1-201ENST00000503899 468 ntBASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 IGHV3-62-201ENST00000520057 340 ntBASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 AC079416.2-201ENST00000625035 1193 ntBASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 AP3S2-216ENST00000617003 1561 ntBASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM42Q8IWZ5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 MBLAC2-202ENST00000514906 1936 ntBASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 CEND1P1-201ENST00000451006 455 ntBASIC15.21■□□□□ 0.03
TRIM42Q8IWZ5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms