Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 AC010327.4-202ENST00000591484 748 ntBASIC15.42■□□□□ 0.06
PACS2Q86VP3 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 GPX1P2-201ENST00000429271 606 ntBASIC15.41■□□□□ 0.06
PACS2Q86VP3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 AC005829.1-201ENST00000570002 483 ntBASIC15.41■□□□□ 0.06
PACS2Q86VP3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 C20orf181-201ENST00000623918 480 ntBASIC15.41■□□□□ 0.06
PACS2Q86VP3 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.41■□□□□ 0.06
PACS2Q86VP3 PCDHB18P-202ENST00000526308 3197 ntBASIC15.41■□□□□ 0.06
PACS2Q86VP3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PACS2Q86VP3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PACS2Q86VP3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
PACS2Q86VP3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PACS2Q86VP3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.4■□□□□ 0.06
PACS2Q86VP3 ACE3P-201ENST00000423435 1973 ntBASIC15.4■□□□□ 0.06
PACS2Q86VP3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.4■□□□□ 0.06
PACS2Q86VP3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.4■□□□□ 0.06
PACS2Q86VP3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 RPSAP43-201ENST00000402237 625 ntBASIC15.4■□□□□ 0.06
PACS2Q86VP3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.4■□□□□ 0.06
PACS2Q86VP3 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.4■□□□□ 0.06
PACS2Q86VP3 AL392088.1-201ENST00000428364 670 ntBASIC15.4■□□□□ 0.06
PACS2Q86VP3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PACS2Q86VP3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
PACS2Q86VP3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms