Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.99■□□□□ 0.47
CTR9Q6PD62 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.99■□□□□ 0.47
CTR9Q6PD62 MIR1908-201ENST00000410394 80 ntBASIC17.99■□□□□ 0.47
CTR9Q6PD62 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
CTR9Q6PD62 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTR9Q6PD62 AP003171.2-201ENST00000528208 925 ntBASIC17.99■□□□□ 0.47
CTR9Q6PD62 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.99■□□□□ 0.47
CTR9Q6PD62 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.99■□□□□ 0.47
CTR9Q6PD62 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
CTR9Q6PD62 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTR9Q6PD62 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.99■□□□□ 0.47
CTR9Q6PD62 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTR9Q6PD62 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.99■□□□□ 0.47
CTR9Q6PD62 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CTR9Q6PD62 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.99■□□□□ 0.47
CTR9Q6PD62 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CTR9Q6PD62 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.98■□□□□ 0.47
CTR9Q6PD62 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.98■□□□□ 0.47
CTR9Q6PD62 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.98■□□□□ 0.47
CTR9Q6PD62 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CTR9Q6PD62 C2orf69P2-201ENST00000562032 1123 ntBASIC17.98■□□□□ 0.47
CTR9Q6PD62 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.98■□□□□ 0.47
CTR9Q6PD62 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.98■□□□□ 0.47
CTR9Q6PD62 AC010328.2-201ENST00000597698 1111 ntBASIC17.98■□□□□ 0.47
CTR9Q6PD62 WASH3P-207ENST00000560956 1394 ntBASIC17.98■□□□□ 0.47
CTR9Q6PD62 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.98■□□□□ 0.47
CTR9Q6PD62 AC091951.1-201ENST00000512854 2465 ntBASIC17.98■□□□□ 0.47
CTR9Q6PD62 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CTR9Q6PD62 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CTR9Q6PD62 TUBB1P2-201ENST00000422712 1306 ntBASIC17.98■□□□□ 0.47
CTR9Q6PD62 TUBB1P1-201ENST00000503144 1300 ntBASIC17.98■□□□□ 0.47
CTR9Q6PD62 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
CTR9Q6PD62 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTR9Q6PD62 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTR9Q6PD62 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTR9Q6PD62 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTR9Q6PD62 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTR9Q6PD62 DBET-201ENST00000630918 3363 ntBASIC17.97■□□□□ 0.47
CTR9Q6PD62 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CTR9Q6PD62 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTR9Q6PD62 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.97■□□□□ 0.47
CTR9Q6PD62 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CTR9Q6PD62 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.97■□□□□ 0.47
CTR9Q6PD62 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.97■□□□□ 0.47
CTR9Q6PD62 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.97■□□□□ 0.47
CTR9Q6PD62 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTR9Q6PD62 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTR9Q6PD62 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.97■□□□□ 0.47
CTR9Q6PD62 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.97■□□□□ 0.47
CTR9Q6PD62 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.97■□□□□ 0.47
CTR9Q6PD62 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.97■□□□□ 0.47
CTR9Q6PD62 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTR9Q6PD62 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTR9Q6PD62 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.97■□□□□ 0.47
CTR9Q6PD62 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.97■□□□□ 0.47
CTR9Q6PD62 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTR9Q6PD62 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CTR9Q6PD62 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CTR9Q6PD62 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTR9Q6PD62 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTR9Q6PD62 AL354989.2-201ENST00000435838 1540 ntBASIC17.97■□□□□ 0.47
CTR9Q6PD62 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTR9Q6PD62 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTR9Q6PD62 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
CTR9Q6PD62 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.97■□□□□ 0.47
CTR9Q6PD62 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTR9Q6PD62 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTR9Q6PD62 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTR9Q6PD62 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTR9Q6PD62 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.96■□□□□ 0.47
CTR9Q6PD62 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms