Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3F3CQ6NXT2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 POM121L8P-201ENST00000417732 1281 ntBASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 POM121L9P-203ENST00000441984 1285 ntBASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 PFN1P12-201ENST00000455938 534 ntBASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 C2orf69P2-201ENST00000562032 1123 ntBASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 ECM1P1-201ENST00000604092 1279 ntBASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 AC104581.4-201ENST00000623126 3052 ntBASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 AL360270.3-201ENST00000609118 1348 ntBASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
H3F3CQ6NXT2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 AC007326.2-201ENST00000624224 7579 ntBASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 AC022494.1-201ENST00000466044 728 ntBASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 MIR4525-201ENST00000580000 75 ntBASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 RN7SL219P-201ENST00000582872 296 ntBASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms