Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 AL359881.3-201ENST00000602640 1721 ntBASIC12.14□□□□□ -0.47
FAM78BQ5VT40 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 AL607033.1-201ENST00000623900 1599 ntBASIC12.14□□□□□ -0.47
FAM78BQ5VT40 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 EEF1DP4-201ENST00000446006 880 ntBASIC12.14□□□□□ -0.47
FAM78BQ5VT40 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 AC040169.1-201ENST00000565382 521 ntBASIC12.14□□□□□ -0.47
FAM78BQ5VT40 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 AC026979.3-201ENST00000607315 403 ntBASIC12.14□□□□□ -0.47
FAM78BQ5VT40 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
FAM78BQ5VT40 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 AC097359.2-201ENST00000604992 2389 ntBASIC12.13□□□□□ -0.47
FAM78BQ5VT40 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 FAM220BP-201ENST00000377689 816 ntBASIC12.13□□□□□ -0.47
FAM78BQ5VT40 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 POLD2P1-201ENST00000511220 997 ntBASIC12.13□□□□□ -0.47
FAM78BQ5VT40 AC011467.4-201ENST00000594891 528 ntBASIC12.13□□□□□ -0.47
FAM78BQ5VT40 AC091812.2-201ENST00000619081 385 ntBASIC12.13□□□□□ -0.47
FAM78BQ5VT40 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
FAM78BQ5VT40 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms