Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
PUDPQ08623 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PUDPQ08623 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PUDPQ08623 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PUDPQ08623 AC007686.3-201ENST00000619017 3487 ntBASIC13.93□□□□□ -0.18
PUDPQ08623 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PUDPQ08623 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PUDPQ08623 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PUDPQ08623 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.93□□□□□ -0.18
PUDPQ08623 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PUDPQ08623 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.93□□□□□ -0.18
PUDPQ08623 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PUDPQ08623 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PUDPQ08623 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PUDPQ08623 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PUDPQ08623 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.92□□□□□ -0.18
PUDPQ08623 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 AC005912.2-201ENST00000619492 2400 ntBASIC13.92□□□□□ -0.18
PUDPQ08623 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
PUDPQ08623 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
PUDPQ08623 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 AC041040.2-201ENST00000622926 2899 ntBASIC13.92□□□□□ -0.18
PUDPQ08623 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
PUDPQ08623 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.92□□□□□ -0.18
PUDPQ08623 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.92□□□□□ -0.18
PUDPQ08623 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.92□□□□□ -0.18
PUDPQ08623 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.92□□□□□ -0.18
PUDPQ08623 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PUDPQ08623 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.92□□□□□ -0.18
PUDPQ08623 AC135586.1-201ENST00000539323 574 ntBASIC13.92□□□□□ -0.18
PUDPQ08623 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.92□□□□□ -0.18
PUDPQ08623 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
PUDPQ08623 AL390955.2-201ENST00000603032 514 ntBASIC13.92□□□□□ -0.18
PUDPQ08623 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.92□□□□□ -0.18
PUDPQ08623 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PUDPQ08623 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.92□□□□□ -0.18
PUDPQ08623 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.92□□□□□ -0.18
PUDPQ08623 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PUDPQ08623 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PUDPQ08623 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PUDPQ08623 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.92□□□□□ -0.18
PUDPQ08623 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PUDPQ08623 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PUDPQ08623 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PUDPQ08623 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.91□□□□□ -0.18
PUDPQ08623 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PUDPQ08623 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.91□□□□□ -0.18
PUDPQ08623 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PUDPQ08623 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PUDPQ08623 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PUDPQ08623 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PUDPQ08623 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
PUDPQ08623 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PUDPQ08623 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
PUDPQ08623 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PUDPQ08623 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PUDPQ08623 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.91□□□□□ -0.18
PUDPQ08623 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PUDPQ08623 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
PUDPQ08623 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.91□□□□□ -0.18
PUDPQ08623 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.91□□□□□ -0.18
PUDPQ08623 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PUDPQ08623 FAM8A3P-201ENST00000427218 844 ntBASIC13.91□□□□□ -0.18
PUDPQ08623 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.91□□□□□ -0.18
PUDPQ08623 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.91□□□□□ -0.18
PUDPQ08623 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.91□□□□□ -0.18
PUDPQ08623 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.91□□□□□ -0.18
PUDPQ08623 MEIS3P1-201ENST00000495167 958 ntBASIC13.91□□□□□ -0.18
PUDPQ08623 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
PUDPQ08623 AC093214.1-201ENST00000511688 1107 ntBASIC13.91□□□□□ -0.18
PUDPQ08623 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.91□□□□□ -0.18
PUDPQ08623 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.91□□□□□ -0.18
PUDPQ08623 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.91□□□□□ -0.18
PUDPQ08623 AC000095.1-201ENST00000603208 874 ntBASIC13.91□□□□□ -0.18
PUDPQ08623 AC025181.2-201ENST00000606994 802 ntBASIC13.91□□□□□ -0.18
PUDPQ08623 AC008738.7-201ENST00000609744 511 ntBASIC13.91□□□□□ -0.18
PUDPQ08623 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
PUDPQ08623 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PUDPQ08623 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PUDPQ08623 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PUDPQ08623 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
PUDPQ08623 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PUDPQ08623 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.91□□□□□ -0.18
PUDPQ08623 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
PUDPQ08623 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms