Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SCN7AQ01118 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN7AQ01118 LYPLA2P1-203ENST00000447689 696 ntBASIC18.35■□□□□ 0.53
SCN7AQ01118 CD164-210ENST00000512821 964 ntTSL 2 BASIC18.35■□□□□ 0.53
SCN7AQ01118 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC18.35■□□□□ 0.53
SCN7AQ01118 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC18.35■□□□□ 0.53
SCN7AQ01118 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
SCN7AQ01118 AC009084.3-201ENST00000623356 437 ntBASIC18.35■□□□□ 0.53
SCN7AQ01118 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC18.35■□□□□ 0.53
SCN7AQ01118 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SCN7AQ01118 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN7AQ01118 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.35■□□□□ 0.53
SCN7AQ01118 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SCN7AQ01118 AC136621.1-201ENST00000624017 2304 ntBASIC18.35■□□□□ 0.53
SCN7AQ01118 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.35■□□□□ 0.53
SCN7AQ01118 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN7AQ01118 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC18.35■□□□□ 0.53
SCN7AQ01118 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.35■□□□□ 0.53
SCN7AQ01118 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN7AQ01118 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN7AQ01118 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN7AQ01118 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN7AQ01118 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC18.34■□□□□ 0.53
SCN7AQ01118 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC18.34■□□□□ 0.53
SCN7AQ01118 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC18.34■□□□□ 0.53
SCN7AQ01118 AC138701.2-201ENST00000553634 226 ntBASIC18.34■□□□□ 0.53
SCN7AQ01118 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC18.34■□□□□ 0.53
SCN7AQ01118 AC124068.2-201ENST00000569473 1109 ntBASIC18.34■□□□□ 0.53
SCN7AQ01118 ELP5-212ENST00000574255 671 ntTSL 2 BASIC18.34■□□□□ 0.53
SCN7AQ01118 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN7AQ01118 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC18.34■□□□□ 0.53
SCN7AQ01118 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC18.34■□□□□ 0.53
SCN7AQ01118 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SCN7AQ01118 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.34■□□□□ 0.53
SCN7AQ01118 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN7AQ01118 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SCN7AQ01118 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.34■□□□□ 0.53
SCN7AQ01118 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCN7AQ01118 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN7AQ01118 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN7AQ01118 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SCN7AQ01118 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC18.34■□□□□ 0.53
SCN7AQ01118 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCN7AQ01118 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCN7AQ01118 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC18.34■□□□□ 0.53
SCN7AQ01118 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.34■□□□□ 0.53
SCN7AQ01118 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN7AQ01118 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN7AQ01118 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SCN7AQ01118 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCN7AQ01118 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCN7AQ01118 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.33■□□□□ 0.52
SCN7AQ01118 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN7AQ01118 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN7AQ01118 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC18.33■□□□□ 0.52
SCN7AQ01118 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC18.33■□□□□ 0.52
SCN7AQ01118 KRT8P1-201ENST00000557533 1207 ntBASIC18.33■□□□□ 0.52
SCN7AQ01118 MT3-203ENST00000565838 421 ntTSL 3 BASIC18.33■□□□□ 0.52
SCN7AQ01118 MIR2392-201ENST00000584881 84 ntBASIC18.33■□□□□ 0.52
SCN7AQ01118 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC18.33■□□□□ 0.52
SCN7AQ01118 AL132780.4-201ENST00000624870 1135 ntBASIC18.33■□□□□ 0.52
SCN7AQ01118 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.33■□□□□ 0.52
SCN7AQ01118 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.33■□□□□ 0.52
SCN7AQ01118 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC18.33■□□□□ 0.52
SCN7AQ01118 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCN7AQ01118 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.52
SCN7AQ01118 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
SCN7AQ01118 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCN7AQ01118 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN7AQ01118 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SCN7AQ01118 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.33■□□□□ 0.52
SCN7AQ01118 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN7AQ01118 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SCN7AQ01118 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCN7AQ01118 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.32■□□□□ 0.52
SCN7AQ01118 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SCN7AQ01118 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SCN7AQ01118 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN7AQ01118 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCN7AQ01118 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SCN7AQ01118 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCN7AQ01118 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC18.32■□□□□ 0.52
SCN7AQ01118 AC073869.2-201ENST00000417338 1026 ntBASIC18.32■□□□□ 0.52
SCN7AQ01118 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SCN7AQ01118 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCN7AQ01118 RN7SL818P-201ENST00000485099 259 ntBASIC18.32■□□□□ 0.52
SCN7AQ01118 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC18.32■□□□□ 0.52
SCN7AQ01118 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.32■□□□□ 0.52
SCN7AQ01118 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.32■□□□□ 0.52
SCN7AQ01118 RN7SL665P-201ENST00000578793 300 ntBASIC18.32■□□□□ 0.52
SCN7AQ01118 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC18.32■□□□□ 0.52
SCN7AQ01118 RN7SL725P-201ENST00000606439 259 ntBASIC18.32■□□□□ 0.52
SCN7AQ01118 AC009560.1-201ENST00000620208 434 ntBASIC18.32■□□□□ 0.52
SCN7AQ01118 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN7AQ01118 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN7AQ01118 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.32■□□□□ 0.52
SCN7AQ01118 AP002353.1-201ENST00000528257 1599 ntBASIC18.32■□□□□ 0.52
SCN7AQ01118 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN7AQ01118 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SCN7AQ01118 PPT1-215ENST00000641471 2368 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms