Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC104457.1-201ENST00000401024 814 ntBASIC15□□□□□ -0.01
SRP54P61011 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15□□□□□ -0.01
SRP54P61011 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 EIF3FP3-201ENST00000434851 1086 ntBASIC15□□□□□ -0.01
SRP54P61011 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15□□□□□ -0.01
SRP54P61011 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15□□□□□ -0.01
SRP54P61011 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15□□□□□ -0.01
SRP54P61011 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15□□□□□ -0.01
SRP54P61011 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15□□□□□ -0.01
SRP54P61011 HNRNPA1P48-202ENST00000565308 961 ntBASIC15□□□□□ -0.01
SRP54P61011 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 MIR6869-201ENST00000619434 62 ntBASIC15□□□□□ -0.01
SRP54P61011 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15□□□□□ -0.01
SRP54P61011 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
SRP54P61011 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 AL354989.2-201ENST00000435838 1540 ntBASIC15□□□□□ -0.01
SRP54P61011 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15□□□□□ -0.01
SRP54P61011 ZBTB45P1-201ENST00000452761 1456 ntBASIC15□□□□□ -0.01
SRP54P61011 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15□□□□□ -0.01
SRP54P61011 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15□□□□□ -0.01
SRP54P61011 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SRP54P61011 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SRP54P61011 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
SRP54P61011 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRP54P61011 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SRP54P61011 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.99□□□□□ -0.01
SRP54P61011 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.99□□□□□ -0.01
SRP54P61011 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SRP54P61011 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SRP54P61011 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.99□□□□□ -0.01
SRP54P61011 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SRP54P61011 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 PFN1P12-201ENST00000455938 534 ntBASIC14.99□□□□□ -0.01
SRP54P61011 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.99□□□□□ -0.01
SRP54P61011 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.99□□□□□ -0.01
SRP54P61011 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.99□□□□□ -0.01
SRP54P61011 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.99□□□□□ -0.01
SRP54P61011 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SRP54P61011 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.99□□□□□ -0.01
SRP54P61011 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
SRP54P61011 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.99□□□□□ -0.01
SRP54P61011 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.99□□□□□ -0.01
SRP54P61011 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRP54P61011 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 AC097376.2-205ENST00000610159 5334 ntBASIC14.98□□□□□ -0.01
SRP54P61011 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SRP54P61011 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SRP54P61011 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.98□□□□□ -0.01
SRP54P61011 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.98□□□□□ -0.01
SRP54P61011 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
SRP54P61011 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.98□□□□□ -0.01
SRP54P61011 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SRP54P61011 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.98□□□□□ -0.01
SRP54P61011 AC022494.1-201ENST00000466044 728 ntBASIC14.98□□□□□ -0.01
SRP54P61011 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.98□□□□□ -0.01
SRP54P61011 FAM8A2P-201ENST00000528813 1142 ntBASIC14.98□□□□□ -0.01
SRP54P61011 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRP54P61011 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.98□□□□□ -0.01
SRP54P61011 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.98□□□□□ -0.01
SRP54P61011 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SRP54P61011 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.98□□□□□ -0.01
SRP54P61011 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms