Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH12P55289 TEX28P1-201ENST00000613479 1221 ntBASIC14.21□□□□□ -0.13
CDH12P55289 TEX28P2-201ENST00000617764 1221 ntBASIC14.21□□□□□ -0.13
CDH12P55289 AL136317.3-201ENST00000618497 906 ntBASIC14.21□□□□□ -0.13
CDH12P55289 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH12P55289 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH12P55289 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH12P55289 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 AC126335.2-201ENST00000623362 4637 ntBASIC14.21□□□□□ -0.13
CDH12P55289 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH12P55289 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH12P55289 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CDH12P55289 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CDH12P55289 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH12P55289 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH12P55289 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH12P55289 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CDH12P55289 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CDH12P55289 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDH12P55289 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH12P55289 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CDH12P55289 TUBB3P1-201ENST00000405796 1332 ntBASIC14.2□□□□□ -0.14
CDH12P55289 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH12P55289 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDH12P55289 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CDH12P55289 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CDH12P55289 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.2□□□□□ -0.14
CDH12P55289 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.2□□□□□ -0.14
CDH12P55289 RPL13P2-201ENST00000440687 659 ntBASIC14.2□□□□□ -0.14
CDH12P55289 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH12P55289 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH12P55289 LINC01115-203ENST00000606068 577 ntBASIC14.2□□□□□ -0.14
CDH12P55289 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.2□□□□□ -0.14
CDH12P55289 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDH12P55289 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH12P55289 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH12P55289 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH12P55289 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDH12P55289 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH12P55289 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH12P55289 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDH12P55289 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH12P55289 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH12P55289 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
CDH12P55289 HSPA7-201ENST00000445535 1927 ntBASIC14.19□□□□□ -0.14
CDH12P55289 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.19□□□□□ -0.14
CDH12P55289 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CDH12P55289 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CDH12P55289 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
CDH12P55289 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH12P55289 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH12P55289 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH12P55289 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CDH12P55289 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH12P55289 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH12P55289 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CDH12P55289 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH12P55289 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH12P55289 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CDH12P55289 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.19□□□□□ -0.14
CDH12P55289 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH12P55289 AC015922.1-201ENST00000421102 1152 ntBASIC14.19□□□□□ -0.14
CDH12P55289 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH12P55289 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.19□□□□□ -0.14
CDH12P55289 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH12P55289 RN7SL618P-201ENST00000477850 296 ntBASIC14.19□□□□□ -0.14
CDH12P55289 AC125807.1-201ENST00000483097 614 ntBASIC14.19□□□□□ -0.14
CDH12P55289 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH12P55289 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.19□□□□□ -0.14
CDH12P55289 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.19□□□□□ -0.14
CDH12P55289 AC010336.2-201ENST00000564226 506 ntBASIC14.19□□□□□ -0.14
CDH12P55289 AC051619.7-201ENST00000568314 623 ntBASIC14.19□□□□□ -0.14
CDH12P55289 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.19□□□□□ -0.14
CDH12P55289 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH12P55289 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms