Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHB3P54753 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EPHB3P54753 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EPHB3P54753 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EPHB3P54753 TMBIM7P-203ENST00000641617 1718 ntBASIC15.74■□□□□ 0.11
EPHB3P54753 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHB3P54753 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.74■□□□□ 0.11
EPHB3P54753 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EPHB3P54753 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
EPHB3P54753 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
EPHB3P54753 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.73■□□□□ 0.11
EPHB3P54753 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.73■□□□□ 0.11
EPHB3P54753 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 C18orf15-201ENST00000623680 2534 ntBASIC15.73■□□□□ 0.11
EPHB3P54753 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.73■□□□□ 0.11
EPHB3P54753 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.73■□□□□ 0.11
EPHB3P54753 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
EPHB3P54753 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.73■□□□□ 0.11
EPHB3P54753 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.73■□□□□ 0.11
EPHB3P54753 AL008707.1-201ENST00000422498 534 ntBASIC15.73■□□□□ 0.11
EPHB3P54753 RNMTL1P1-201ENST00000454103 560 ntBASIC15.73■□□□□ 0.11
EPHB3P54753 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.73■□□□□ 0.11
EPHB3P54753 AC106794.1-201ENST00000506935 792 ntBASIC15.73■□□□□ 0.11
EPHB3P54753 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.73■□□□□ 0.11
EPHB3P54753 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.73■□□□□ 0.11
EPHB3P54753 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.73■□□□□ 0.11
EPHB3P54753 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.73■□□□□ 0.11
EPHB3P54753 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
EPHB3P54753 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
EPHB3P54753 AC020910.5-201ENST00000623668 1865 ntBASIC15.73■□□□□ 0.11
EPHB3P54753 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.73■□□□□ 0.11
EPHB3P54753 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.73■□□□□ 0.11
EPHB3P54753 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.73■□□□□ 0.11
EPHB3P54753 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.73■□□□□ 0.11
EPHB3P54753 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.73■□□□□ 0.11
EPHB3P54753 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
EPHB3P54753 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.73■□□□□ 0.11
EPHB3P54753 AC126365.1-201ENST00000578585 1514 ntBASIC15.73■□□□□ 0.11
EPHB3P54753 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
EPHB3P54753 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.73■□□□□ 0.11
EPHB3P54753 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.73■□□□□ 0.11
EPHB3P54753 AC023024.2-201ENST00000623561 1993 ntBASIC15.73■□□□□ 0.11
EPHB3P54753 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHB3P54753 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
EPHB3P54753 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHB3P54753 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHB3P54753 AL138725.1-201ENST00000407347 1314 ntBASIC15.72■□□□□ 0.11
EPHB3P54753 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
EPHB3P54753 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.72■□□□□ 0.11
EPHB3P54753 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHB3P54753 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHB3P54753 HYMAI-201ENST00000635591 3347 ntBASIC15.72■□□□□ 0.11
EPHB3P54753 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
EPHB3P54753 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
EPHB3P54753 SHC1P1-201ENST00000425230 1745 ntBASIC15.72■□□□□ 0.11
EPHB3P54753 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
EPHB3P54753 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
EPHB3P54753 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.72■□□□□ 0.11
EPHB3P54753 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
EPHB3P54753 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
EPHB3P54753 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
EPHB3P54753 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.72■□□□□ 0.11
EPHB3P54753 MIR769-201ENST00000390225 118 ntBASIC15.72■□□□□ 0.11
EPHB3P54753 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
EPHB3P54753 AL662890.1-201ENST00000396818 632 ntBASIC15.72■□□□□ 0.11
EPHB3P54753 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.72■□□□□ 0.11
EPHB3P54753 AC016700.1-201ENST00000429424 312 ntBASIC15.72■□□□□ 0.11
EPHB3P54753 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.72■□□□□ 0.11
EPHB3P54753 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.72■□□□□ 0.11
EPHB3P54753 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.72■□□□□ 0.11
EPHB3P54753 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.72■□□□□ 0.11
EPHB3P54753 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
EPHB3P54753 AP000845.1-201ENST00000581677 2131 ntBASIC15.72■□□□□ 0.11
EPHB3P54753 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.72■□□□□ 0.11
EPHB3P54753 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.72■□□□□ 0.11
EPHB3P54753 AL021578.1-201ENST00000613646 709 ntBASIC15.72■□□□□ 0.11
EPHB3P54753 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms